RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 UGT3A2Q3SY77 523 aa27.53■■■□□ 2
CBX4-201ENST00000269397 FBXO48Q5FWF7 155 aa27.53■■■□□ 2
CBX4-201ENST00000269397 PATL1Q86TB9 770 aaKnown RBP27.53■■■□□ 2
CBX4-201ENST00000269397 PTERQ96BW5 349 aa27.53■■■□□ 2
CBX4-201ENST00000269397 ROPN1LQ96C74 230 aa27.53■■■□□ 2
CBX4-201ENST00000269397 THAP11Q96EK4 314 aa27.53■■■□□ 2
CBX4-201ENST00000269397 MPP6Q9NZW5 540 aa27.53■■■□□ 2
CBX4-201ENST00000269397 VWA7Q9Y334 891 aa27.53■■■□□ 2
CBX4-201ENST00000269397 ANGPT2O15123 496 aa27.52■■■□□ 2
CBX4-201ENST00000269397 MSI1O43347 362 aaKnown RBP27.52■■■□□ 2
CBX4-201ENST00000269397 SUPT3HO75486 399 aa27.52■■■□□ 2
CBX4-201ENST00000269397 SMIM10L2AP0DMW4 78 aa27.52■■■□□ 2
CBX4-201ENST00000269397 SMIM10L2BP0DMW5 78 aa27.52■■■□□ 2
CBX4-201ENST00000269397 ACADVLP49748 655 aa27.52■■■□□ 2
CBX4-201ENST00000269397 XKR4Q5GH76 650 aa27.52■■■□□ 2
CBX4-201ENST00000269397 FGD3Q5JSP0 725 aa27.52■■■□□ 2
CBX4-201ENST00000269397 ISCA2Q86U28 154 aa27.52■■■□□ 2
CBX4-201ENST00000269397 EMID1Q96A84 441 aaPredicted RBP27.52■■■□□ 2
CBX4-201ENST00000269397 KATNBL1Q9H079 304 aa27.52■■■□□ 2
CBX4-201ENST00000269397 POLR1BQ9H9Y6 1135 aa27.52■■■□□ 2
CBX4-201ENST00000269397 MRGBPQ9NV56 204 aa27.52■■■□□ 2
CBX4-201ENST00000269397 FXYD1O00168 92 aa27.52■■■□□ 2
CBX4-201ENST00000269397 CXCL11O14625 94 aa27.52■■■□□ 2
CBX4-201ENST00000269397 PIP5K1BO14986 540 aa27.52■■■□□ 2
CBX4-201ENST00000269397 INPP4BO15327 924 aa27.52■■■□□ 2
CBX4-201ENST00000269397 CLOCKO15516 846 aa27.52■■■□□ 2
CBX4-201ENST00000269397 TPP2P29144 1249 aaPredicted RBP27.52■■■□□ 2
CBX4-201ENST00000269397 PLCL1Q15111 1095 aa27.52■■■□□ 2
CBX4-201ENST00000269397 SLC36A3Q495N2 470 aa27.52■■■□□ 2
CBX4-201ENST00000269397 SLC22A9Q8IVM8 553 aa27.52■■■□□ 2
CBX4-201ENST00000269397 HDAC10Q969S8 669 aa27.52■■■□□ 2
CBX4-201ENST00000269397 NSUN5Q96P11 429 aaKnown RBP27.52■■■□□ 2
CBX4-201ENST00000269397 HIPK3Q9H422 1215 aa27.52■■■□□ 2
CBX4-201ENST00000269397 FAIMQ9NVQ4 179 aa27.52■■■□□ 2
CBX4-201ENST00000269397 BTRCQ9Y297 605 aa27.52■■■□□ 2
CBX4-201ENST00000269397 H3BMQ9 156 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 CES1P23141 567 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 BDNFP23560 247 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 INPP5AQ14642 412 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 INTS11Q5TA45 600 aaKnown RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 TWF2Q6IBS0 349 aaKnown RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 Q6ZNX1 250 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 DNAJB14Q8TBM8 379 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 TRPC4APQ8TEL6 797 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 COG8Q96MW5 612 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 RPF2Q9H7B2 306 aaKnown RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 MID1IP1Q9NPA3 183 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 ZFC3H1O60293 1989 aaKnown RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 ARPC2O15144 300 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 MOCS2O96007 188 aaPredicted RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 ITKQ08881 620 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 RAB39AQ14964 217 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 NEDD8Q15843 81 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 CYP51A1Q16850 503 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 CROCCP3Q8IVE0 287 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 ZUFSPQ96AP4 578 aa27.51■■□□□ 1.99
CBX4-201ENST00000269397 MARCH4Q9P2E8 410 aaPredicted RBP27.51■■□□□ 1.99
CBX4-201ENST00000269397 SLC6A2P23975 617 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 VARSP26640 1264 aaKnown RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 LEPRP48357 1165 aaKnown RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 ARSDP51689 593 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 ATP6V0D1P61421 351 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 ADGRG5Q8IZF4 528 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 TNIP2Q8NFZ5 429 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 SCAMP5Q8TAC9 235 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 PTCD2Q8WV60 388 aaKnown RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 PIF1Q9H611 641 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 TBC1D13Q9NVG8 400 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 ZNF236Q9UL36 1845 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 LINC00032P0C843 101 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 CLCN5P51795 746 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 FUT11Q495W5 492 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 RABL3Q5HYI8 236 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 AARS2Q5JTZ9 985 aaKnown RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 OR13J1Q8NGT2 312 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 MAGEE2Q8TD90 523 aaPredicted RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 TSPYL2Q9H2G4 693 aaPredicted RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 TUBA8Q9NY65 449 aaPredicted RBP27.5■■□□□ 1.99
CBX4-201ENST00000269397 KCTD3Q9Y597 815 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 FADS3Q9Y5Q0 445 aa27.5■■□□□ 1.99
CBX4-201ENST00000269397 TRIM64CA6NLI5 447 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 ACOX3O15254 700 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 PAGE1O75459 146 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 CCT8P50990 548 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 CLYBLQ8N0X4 340 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 C3orf58Q8NDZ4 430 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 MRM3Q9HC36 420 aaKnown RBP27.49■■□□□ 1.99
CBX4-201ENST00000269397 ABCD2Q9UBJ2 740 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 LTBP3Q9NS15 1303 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 H3BMM5 538 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 CDK14O94921 469 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 CLCNKBP51801 687 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 PTGR2Q8N8N7 351 aaPredicted RBP27.49■■□□□ 1.99
CBX4-201ENST00000269397 TWIST2Q8WVJ9 160 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 VPS33AQ96AX1 596 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 TUBGCP3Q96CW5 907 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 CENPNQ96H22 339 aaPredicted RBP27.49■■□□□ 1.99
CBX4-201ENST00000269397 C9orf16Q9BUW7 83 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 NDUFAF1Q9Y375 327 aa27.49■■□□□ 1.99
CBX4-201ENST00000269397 TRIP12Q14669 1992 aaPredicted RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms