RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 MRPL57Q9BQC6 102 aaKnown RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 CATSPERZQ9NTU4 200 aa23.17■■□□□ 1.3
RAB40B-201ENST00000269347 POLR3BQ9NW08 1133 aaPredicted RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 INTS6Q9UL03 887 aaKnown RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 FNDC3AQ9Y2H6 1198 aaKnown RBP23.17■■□□□ 1.3
RAB40B-201ENST00000269347 A8MT66 165 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ANKRD66B4E2M5 251 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 H3BMM5 538 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 MATN2O00339 956 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ENTPD5O75356 428 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 LTA4HP09960 611 aaKnown RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 PFKPQ01813 784 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 E2F5Q15329 346 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ARMC3Q5W041 872 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ISCA2Q86U28 154 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 HJURPQ8NCD3 748 aaPredicted RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 CLPTM1LQ96KA5 538 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 FKBPLQ9UIM3 349 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 APOBEC2Q9Y235 224 aaKnown RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 HELZP42694 1942 aaKnown RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 NEMP1O14524 444 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 RFPL2O75678 378 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 CD70P32970 193 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 PPM1AP35813 382 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 STC1P52823 247 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ITIH5Q86UX2 942 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 FIBCD1Q8N539 461 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 TEX9Q8N6V9 391 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 SLC30A3Q99726 388 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 LBHD1Q9BQE6 289 aaPredicted RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 CORO1BQ9BR76 489 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 NUF2Q9BZD4 464 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 ALG9Q9H6U8 611 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 PLA2G4CQ9UP65 541 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 RAP2CQ9Y3L5 183 aa23.16■■□□□ 1.3
RAB40B-201ENST00000269347 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.16■■□□□ 1.3
RAB40B-201ENST00000269347 GYG2O15488 501 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 OR1I1O60431 355 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 PEX11AO75192 247 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 ZNF821O75541 412 aaPredicted RBP23.15■■□□□ 1.3
RAB40B-201ENST00000269347 ARHGEF15O94989 841 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 ALPIP09923 528 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 MYL4P12829 197 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 TFEBP19484 476 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 EPHA3P29320 983 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 CDC25CP30307 473 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 NSUN2Q08J23 767 aaKnown RBP eCLIP23.15■■□□□ 1.3
RAB40B-201ENST00000269347 CDH18Q13634 790 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 TYSND1Q2T9J0 566 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 PREPLQ4J6C6 727 aaPredicted RBP23.15■■□□□ 1.3
RAB40B-201ENST00000269347 TRIM67Q6ZTA4 783 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 LCA5Q86VQ0 697 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 CAMK1DQ8IU85 385 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 MFN1Q8IWA4 741 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 TTC30BQ8N4P2 665 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 KDM1BQ8NB78 822 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 KREMEN2Q8NCW0 462 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 DDI1Q8WTU0 396 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 WDR60Q8WVS4 1066 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 CLP1Q92989 425 aaKnown RBP23.15■■□□□ 1.3
RAB40B-201ENST00000269347 PHF21BQ96EK2 531 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 SIKE1Q9BRV8 207 aa23.15■■□□□ 1.3
RAB40B-201ENST00000269347 FZD6O60353 706 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 CTPS1P17812 591 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 CTSOP43234 321 aaPredicted RBP23.14■■□□□ 1.3
RAB40B-201ENST00000269347 RASSF2P50749 326 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 LMAN2Q12907 356 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 TAF1AQ15573 450 aaPredicted RBP23.14■■□□□ 1.3
RAB40B-201ENST00000269347 TSNAXIP1Q2TAA8 658 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 BADQ92934 168 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 ILKAPQ9H0C8 392 aaPredicted RBP23.14■■□□□ 1.3
RAB40B-201ENST00000269347 TAGLN3Q9UI15 199 aa23.14■■□□□ 1.3
RAB40B-201ENST00000269347 BAIAP3O94812 1187 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 EZRP15311 586 aaKnown RBP23.14■■□□□ 1.29
RAB40B-201ENST00000269347 TSPAN8P19075 237 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 AOC1P19801 751 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 CPOXP36551 454 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 PABPC1LQ4VXU2 614 aaKnown RBP23.14■■□□□ 1.29
RAB40B-201ENST00000269347 WLSQ5T9L3 541 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 TMEM198Q66K66 360 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 PEX13Q92968 403 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 TCF25Q9BQ70 676 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 PCDHB9Q9Y5E1 797 aa23.14■■□□□ 1.29
RAB40B-201ENST00000269347 LRRC14BA6NHZ5 514 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 LATS1O95835 1130 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 LRG1P02750 347 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 RPL14P50914 215 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 RHOAP61586 193 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 SLC7A9P82251 487 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 FAM83EQ2M2I3 478 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 PLPP4Q5VZY2 271 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 HTR3DQ70Z44 454 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 NECAB2Q7Z6G3 386 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 LPGAT1Q92604 370 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 DDX50Q9BQ39 737 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 STN1Q9H668 368 aaKnown RBP23.13■■□□□ 1.29
RAB40B-201ENST00000269347 RIMKLBQ9ULI2 386 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 HCFC2Q9Y5Z7 792 aa23.13■■□□□ 1.29
RAB40B-201ENST00000269347 SCN8AQ9UQD0 1980 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms