RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 KDSRQ06136 332 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
SS18-201ENST00000269137 LRRC14Q15048 493 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 BRAT1Q6PJG6 821 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 LYSMD3Q7Z3D4 306 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 PAF1Q8N7H5 531 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 HCAR2Q8TDS4 363 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 CKAP2Q8WWK9 683 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 OSBPL1AQ9BXW6 950 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 GPR63Q9BZJ6 419 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 EPN3Q9H201 632 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 SNX15Q9NRS6 342 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 CATSPERZQ9NTU4 200 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 POLR3BQ9NW08 1133 aaPredicted RBP14.12□□□□□ -0.15
SS18-201ENST00000269137 MARCH4Q9P2E8 410 aaPredicted RBP14.12□□□□□ -0.15
SS18-201ENST00000269137 PLLPQ9Y342 182 aa14.12□□□□□ -0.15
SS18-201ENST00000269137 SPTBN5Q9NRC6 3674 aaKnown RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 TSPAN11A1L157 253 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 OR51F1A6NGY5 319 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 HAUS5O94927 633 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 MPOP05164 745 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 DHRS4L1P0CG22 281 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 GRIA2P42262 883 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 ETV4P43268 484 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 CLCN5P51795 746 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 PTPRRQ15256 657 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 INSCQ1MX18 579 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 USP45Q70EL2 814 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 SDCCAG8Q86SQ7 713 aaPredicted RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 UCMAQ8WVF2 138 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 ATXN7L3BQ96GX2 97 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 TCF12Q99081 682 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 GAS2L1Q99501 681 aaPredicted RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 ZFYVE1Q9HBF4 777 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 MLXIPLQ9NP71 852 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 PCMTD2Q9NV79 361 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 DKK3Q9UBP4 350 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 DCDC2Q9UHG0 476 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 PKP3Q9Y446 797 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 NUMBLQ9Y6R0 609 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 GMNCA6NCL1 334 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 TBC1D3BA6NDS4 549 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 KAT7O95251 611 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 F7P08709 466 aaPredicted RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 ABCG1P45844 678 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 SEPT7Q16181 437 aaKnown RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 TYSND1Q2T9J0 566 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 HHATQ5VTY9 493 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 LVRNQ6Q4G3 990 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 CDHR3Q6ZTQ4 885 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 TPRG1Q6ZUI0 275 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 MICALL1Q8N3F8 863 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 OTUD6BQ8N6M0 293 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 EID2BQ96D98 161 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 MAGEB18Q96M61 343 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 KLHL32Q96NJ5 620 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 SLC13A1Q9BZW2 595 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 IQCGQ9H095 443 aaKnown RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 TMEM245Q9H330 911 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 FBXO6Q9NRD1 293 aaPredicted RBP14.11□□□□□ -0.15
SS18-201ENST00000269137 SLC17A7Q9P2U7 560 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 IL36AQ9UHA7 158 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 SLC39A10Q9ULF5 831 aa14.11□□□□□ -0.15
SS18-201ENST00000269137 C1orf232A0A0U1RR37 186 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 EDDM13A0A1B0GTR0 161 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 FAM95CA0A1B0GW59 222 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 LEFTY1O75610 366 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 BMP1P13497 986 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 FOXN2P32314 431 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 STC1P52823 247 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 POU4F1Q01851 419 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 USP10Q14694 798 aaKnown RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 FNDC3BQ53EP0 1204 aaKnown RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 FASTKD1Q53R41 847 aaKnown RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 NAIF1Q69YI7 327 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 CNSTQ6PJW8 725 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 NUDT18Q6ZVK8 323 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 MICALCLQ6ZW33 695 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 CMC1Q7Z7K0 106 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 CBARPQ8N350 705 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 ACVR1CQ8NER5 493 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 TTC8Q8TAM2 541 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 GRIN3AQ8TCU5 1115 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 ZNF317Q96PQ6 595 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 VPS11Q9H270 941 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 BRD9Q9H8M2 597 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 INTS10Q9NVR2 710 aaKnown RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 THAP10Q9P2Z0 257 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 FKBPLQ9UIM3 349 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 GRID1Q9ULK0 1009 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 CORO1CQ9ULV4 474 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 MUC22E2RYF6 1773 aaPredicted RBP14.1□□□□□ -0.15
SS18-201ENST00000269137 F5P12259 2224 aa14.1□□□□□ -0.15
SS18-201ENST00000269137 A0A096LPK6 155 aa14.09□□□□□ -0.15
SS18-201ENST00000269137 NPIPB15A6NHN6 443 aaPredicted RBP14.09□□□□□ -0.15
SS18-201ENST00000269137 GLRA3O75311 464 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms