RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CHST9Q7L1S5 443 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 DNAJB7Q7Z6W7 309 aaPredicted RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 STYXQ8WUJ0 223 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TRIB2Q92519 343 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 ROGDIQ9GZN7 287 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 PIGVQ9NUD9 493 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 USE1Q9NZ43 259 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TMEM216Q9P0N5 145 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 RWDD3Q9Y3V2 267 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 MTF2Q9Y483 593 aaPredicted RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 KRT20P35900 424 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 NDST2P52849 883 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TAS1R3Q7RTX0 852 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 BHLHE22Q8NFJ8 381 aaPredicted RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 RPL10LQ96L21 214 aaKnown RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SLC39A8Q9C0K1 460 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 GKN1Q9NS71 199 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 ZNF180Q9UJW8 692 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 ANAPC2Q9UJX6 822 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 ASF1AQ9Y294 204 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 GPSM3Q9Y4H4 160 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TRAF6Q9Y4K3 522 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 PTPRJQ12913 1337 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 C9IYK1 514 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TCF4P15884 667 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 HTR1BP28222 390 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 KCNJ2P63252 427 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SLC1A5Q15758 541 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 HECTD2Q5U5R9 776 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 FAM124AQ86V42 546 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 DNAJB14Q8TBM8 379 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SH3GL2Q99962 352 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TMEM245Q9H330 911 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 C11orf49Q9H6J7 331 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 EPS8L2Q9H6S3 715 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SPAG4Q9NPE6 437 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 AASDHPPTQ9NRN7 309 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 PNPOQ9NVS9 261 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 COPG2Q9UBF2 871 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 NDOR1Q9UHB4 597 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TELO2Q9Y4R8 837 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3DA0A087WVF3 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3IA0A087WXS9 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3EA0A087X179 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3KA0A087X1G2 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3FA6NER0 549 aaPredicted RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3LB9A6J9 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 DNTTP04053 509 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3HP0C7X1 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SCNN1AP37088 669 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 RXRGP48443 463 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 LIMK2P53671 638 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3GQ6DHY5 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3CQ6IPX1 549 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 CYP20A1Q6UW02 462 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 OSTM1Q86WC4 334 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 CDK20Q8IZL9 346 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 TBC1D3Q8IZP1 549 aaPredicted RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 DHRSXQ8N5I4 330 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 SLC35F5Q8WV83 523 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 CXorf40BQ96DE9 158 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 PAWRQ96IZ0 340 aaKnown RBP15.42■□□□□ 0.06
TIMP3-201ENST00000266085 GRHL1Q9NZI5 618 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
TIMP3-201ENST00000266085 A0A1W2PQ45 241 aaPredicted RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 A0A1W2PQY0 241 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 KIF1CO43896 1103 aaKnown RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 CDK14O94921 469 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 SLC35G4P0C7Q5 338 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 PIK3R1P27986 724 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 DEFA1P59665 94 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 DEFA3P59666 94 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 CYP4F8P98187 520 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 UBE3AQ05086 875 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 XKR6Q5GH73 641 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 INTS11Q5TA45 600 aaKnown RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 ESRP1Q6NXG1 681 aaKnown RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 CRTC3Q6UUV7 619 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 HFE2Q6ZVN8 426 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 HEXDCQ8WVB3 486 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 NTAN1Q96AB6 310 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 ZNF184Q99676 751 aaPredicted RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 C11orf84Q9BUA3 381 aaPredicted RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 A0A1W2PQ67 120 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 GSNP06396 782 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 EPHX1P07099 455 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 HNF4AP41235 474 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 IL10RBQ08334 325 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 UBAP2LQ14157 1087 aaKnown RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 TPGS2Q68CL5 300 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 CD101Q93033 1021 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 RMND5BQ96G75 393 aaPredicted RBP15.41■□□□□ 0.06
TIMP3-201ENST00000266085 CDH19Q9H159 772 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 ENOPH1Q9UHY7 261 aa15.41■□□□□ 0.06
TIMP3-201ENST00000266085 TCAF1Q9Y4C2 921 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms