RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 NUS1Q96E22 293 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 RBM15Q96T37 977 aaKnown RBP eCLIP16.09■□□□□ 0.17
USE1-201ENST00000263897 LGR4Q9BXB1 951 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 HAUS2Q9NVX0 235 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 PADI4Q9UM07 663 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 DOLKQ9UPQ8 538 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 LRP4O75096 1905 aa16.09■□□□□ 0.17
USE1-201ENST00000263897 PDE2AO00408 941 aaPredicted RBP16.08■□□□□ 0.16
USE1-201ENST00000263897 CTPS1P17812 591 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 TGM2P21980 687 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 ETV3P41162 512 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 NIPAL4Q0D2K0 466 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 ARHGEF7Q14155 803 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 Q6ZVL8 140 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 USP45Q70EL2 814 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 TECPR1Q7Z6L1 1165 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 TSPAN33Q86UF1 283 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 CCDC13Q8IYE1 715 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 PLD5Q8N7P1 536 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 DTD2Q96FN9 168 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 PDXPQ96GD0 296 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 DEPDC7Q96QD5 511 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 LGMNQ99538 433 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 MAK16Q9BXY0 300 aaKnown RBP16.08■□□□□ 0.16
USE1-201ENST00000263897 TEX101Q9BY14 249 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 WDR26Q9H7D7 661 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 FGF22Q9HCT0 170 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 GULP1Q9UBP9 304 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 HEY1Q9Y5J3 304 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 FREM2Q5SZK8 3169 aa16.08■□□□□ 0.16
USE1-201ENST00000263897 A0A0J9YYE9 177 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 A0A0U1RQS6 177 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 PRLP01236 227 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 JCHAINP01591 159 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 TRBC1P01850 177 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 HLA-DQB2P05538 268 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 MAGEA1P43355 309 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 PTSQ03393 145 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 PPIDQ08752 370 aaKnown RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 TCEA2Q15560 299 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 PERM1Q5SV97 790 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 CRTC1Q6UUV9 634 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 RHOT1Q8IXI2 618 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 NAT6Q93015 286 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 ZNF830Q96NB3 372 aaPredicted RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 SMIM14Q96QK8 99 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 MRPL40Q9NQ50 206 aaKnown RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 PHPT1Q9NRX4 125 aaPredicted RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 DDX56Q9NY93 547 aaKnown RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 GPR34Q9UPC5 381 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 CHKBQ9Y259 395 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 TTLL3Q9Y4R7 772 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 PCDHB1Q9Y5F3 818 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 ADAMTS20P59510 1910 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
USE1-201ENST00000263897 CFAP47Q6ZTR5 3102 aa16.07■□□□□ 0.16
USE1-201ENST00000263897 KCNK1O00180 336 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 APOL1O14791 398 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 LCA5LO95447 670 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 KRT1P04264 644 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 MYCLP1P12525 358 aaPredicted RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 TNNT1P13805 278 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 ZFXP17010 805 aaPredicted RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 COMTP21964 271 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 TEAD1P28347 426 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 EPHB1P54762 984 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 HADHBP55084 474 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 RPL26P61254 145 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 IFI35P80217 286 aaPredicted RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 DPTQ07507 201 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 OGFOD3Q6PK18 319 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 C19orf48Q6RUI8 117 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 NLRP8Q86W28 1048 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 CNTD1Q8N815 330 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 ARL10Q8N8L6 244 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 TDRD1Q9BXT4 1180 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 CYP4F12Q9HCS2 524 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 SIRPGQ9P1W8 387 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 RALYQ9UKM9 306 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 RPL26L1Q9UNX3 145 aaKnown RBP16.06■□□□□ 0.16
USE1-201ENST00000263897 HYOU1Q9Y4L1 999 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 UNC13CQ8NB66 2214 aa16.06■□□□□ 0.16
USE1-201ENST00000263897 A0A087WV48 116 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 PRSS38A1L453 326 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 USP12O75317 370 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 FUCA1P04066 466 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 CEACAM5P06731 702 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 ZNF30P17039 623 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 CA4P22748 312 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 NOP2P46087 812 aaKnown RBP16.05■□□□□ 0.16
USE1-201ENST00000263897 PDK1Q15118 436 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 ISXQ2M1V0 245 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms