RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ARF4P18085 180 aaPredicted RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC6A2P23975 617 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 GRM5P41594 1212 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 LEPRP48357 1165 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 ARCN1P48444 511 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PCYT1AP49585 367 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 CLCN5P51795 746 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 EPS8Q12929 822 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PLCL1Q15111 1095 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 TTC23Q5W5X9 447 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 THAP5Q7Z6K1 395 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 TP53INP2Q8IXH6 220 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PDZD8Q8NEN9 1154 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 FAM110BQ8TC76 370 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 L3HYPDHQ96EM0 354 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 TSGA13Q96PP4 275 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PRKD2Q9BZL6 878 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 AKTIPQ9H8T0 292 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 FBXO5Q9UKT4 447 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PCDHA9Q9Y5H5 950 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 UBXN8O00124 270 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 SYNCRIPO60506 623 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 OXTRP30559 389 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC26A3P40879 764 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 SLC1A2P43004 574 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 PGGT1BP53609 377 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 GABARAPL2P60520 117 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 VPS26BQ4G0F5 336 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 ZNF484Q5JVG2 852 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 KIAA0930Q6ICG6 404 aaPredicted RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 CRTC3Q6UUV7 619 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 FKBP9P1Q75LS8 142 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 CYP2U1Q7Z449 544 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 MFSD6LQ8IWD5 586 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 TRAPPC12Q8WVT3 735 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 HDAC2Q92769 488 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 LHPPQ9H008 270 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 GSTO2Q9H4Y5 243 aa12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 WARS2Q9UGM6 360 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-201ENST00000263780 A0A087WZ62 844 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 CACNG3O60359 315 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 DEAF1O75398 565 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 FGF4P08620 206 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 OPRL1P41146 370 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 YAP1P46937 504 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SEMA3BQ13214 749 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 FSCN1Q16658 493 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 KRT27Q7Z3Y8 459 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 DCP1BQ8IZD4 617 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 C8orf59Q8N0T1 100 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 TNIP3Q96KP6 325 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC2A13Q96QE2 648 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 FDXACB1Q9BRP7 624 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 DPEP3Q9H4B8 488 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ALG2Q9H553 416 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 GMPR2Q9P2T1 348 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SNX5Q9Y5X3 404 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 TCRBV5S2A0A599 114 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SUPT7LO94864 414 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 OXSR1O95747 527 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 NTRK1P04629 796 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ALDOCP09972 364 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 LBPP18428 481 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 POLR2IP36954 125 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SERPINB10P48595 397 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 GSK3BP49841 420 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 RAD23AP54725 363 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 GEMP55040 296 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ADIGQ0VDE8 80 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 GRIK2Q13002 908 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 DCAF4L1Q3SXM0 396 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 OTUD1Q5VV17 481 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF470Q6ECI4 717 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 XAF1Q6GPH4 301 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 NEPROQ6NW34 567 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 NIM1KQ8IY84 436 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 PHF21BQ96EK2 531 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 AURKBQ96GD4 344 aaPredicted RBP12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 MUS81Q96NY9 551 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 TNFRSF12AQ9NP84 129 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 ENTPD7Q9NQZ7 604 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 UBP1Q9NZI7 540 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 NME7Q9Y5B8 376 aa12.39□□□□□ -0.43
CHMP2B-201ENST00000263780 MGAMO43451 1857 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 ATP6AP2A0A1C7CYW4 349 aa12.38□□□□□ -0.43
CHMP2B-201ENST00000263780 FXYD1O00168 92 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms