RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 AAR2Q9Y312 384 aaKnown RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 C1orf232A0A0U1RR37 186 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 TM7SF2O76062 418 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 CYP2A6P11509 494 aaPredicted RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 FNTAP49354 379 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 RPL26P61254 145 aaKnown RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 BASP1P80723 227 aaKnown RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 SPEM2Q0P670 501 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 ACOX1Q15067 660 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 C1orf216Q8TAB5 229 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 TM9SF3Q9HD45 589 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 AASDHPPTQ9NRN7 309 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 RPL26L1Q9UNX3 145 aaKnown RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 PPIL1Q9Y3C6 166 aa18.37■□□□□ 0.53
SDF4-201ENST00000263741 ARIH1Q9Y4X5 557 aaPredicted RBP18.37■□□□□ 0.53
SDF4-201ENST00000263741 ZNF106Q9H2Y7 1883 aaKnown RBP18.36■□□□□ 0.53
SDF4-201ENST00000263741 AURKAO14965 403 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 LZTS3O60299 673 aaPredicted RBP18.36■□□□□ 0.53
SDF4-201ENST00000263741 CLDN7O95471 211 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 C1SP09871 688 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 TNNT3P45378 269 aaPredicted RBP18.36■□□□□ 0.53
SDF4-201ENST00000263741 GPS1Q13098 491 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 ARHGEF7Q14155 803 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 SYT12Q8IV01 421 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 C1QTNF2Q9BXJ5 285 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 CD84Q9UIB8 345 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 NEU2Q9Y3R4 380 aa18.36■□□□□ 0.53
SDF4-201ENST00000263741 E7EVH7 732 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 ECEL1O95672 775 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 CFIP05156 583 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 APRTP07741 180 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 ETV3P41162 512 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 GRIA1P42261 906 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 SGCGQ13326 291 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 CCDC70Q6NSX1 233 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 KLHDC8BQ8IXV7 354 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 NDUFAF2Q8N183 169 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 BLOC1S5Q8TDH9 187 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 EID2BQ96D98 161 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 LOXL4Q96JB6 756 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 KRT12Q99456 494 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 KLF6Q99612 283 aaPredicted RBP18.35■□□□□ 0.53
SDF4-201ENST00000263741 ZNF711Q9Y462 761 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 BCAT2O15382 392 aaPredicted RBP18.35■□□□□ 0.53
SDF4-201ENST00000263741 RECQL5O94762 991 aaPredicted RBP18.35■□□□□ 0.53
SDF4-201ENST00000263741 AP2A1O95782 977 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 RETP07949 1114 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
SDF4-201ENST00000263741 FDFT1P37268 417 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 LMAN1P49257 510 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 SEMA5AQ13591 1074 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 PPP1R7Q15435 360 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 CDKN3Q16667 212 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 RANBP10Q6VN20 620 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 PELI3Q8N2H9 469 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 MBNL1Q9NR56 388 aaKnown RBP18.35■□□□□ 0.53
SDF4-201ENST00000263741 RNF14Q9UBS8 474 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 RAB21Q9UL25 225 aa18.35■□□□□ 0.53
SDF4-201ENST00000263741 TCRBV7S3A2A0A539 114 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 BUD23O43709 281 aaKnown RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 WNT1P04628 370 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 HLA-DPA1P20036 260 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 HNRNPA2B1P22626 353 aaKnown RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 IGFALSP35858 605 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 PTGIRP43119 386 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 CSNK1EP49674 416 aaKnown RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 LMNB2Q03252 620 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 PTSQ03393 145 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 MTM1Q13496 603 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 IRF4Q15306 451 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 SF3A2Q15428 464 aaKnown RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 NAPEPLDQ6IQ20 393 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 DENND5AQ6IQ26 1287 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GCNT7Q6ZNI0 430 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 Q6ZVL8 140 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 HDXQ7Z353 690 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 SPATA4Q8NEY3 305 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 TRIM51Q9BSJ1 452 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GOLGA6CA6NDK9 693 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GOLGA6BA6NDN3 693 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 POM121BA6NF01 834 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 SASH3O75995 380 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GAS8O95995 478 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 EPOP01588 193 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 PCCBP05166 539 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 FGF1P05230 155 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GOLGA6DP0CG33 693 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 TPH1P17752 444 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 WSCD2Q2TBF2 565 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 TRIM61Q5EBN2 209 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 PEAR1Q5VY43 1037 aaPredicted RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 TP53I13Q8NBR0 393 aaPredicted RBP18.34■□□□□ 0.53
SDF4-201ENST00000263741 TMEM145Q8NBT3 493 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 OR52K1Q8NGK4 314 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GRK7Q8WTQ7 553 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 COQ10AQ96MF6 247 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms