RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 KIAA1614Q5VZ46 1190 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 AFMIDQ63HM1 303 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 CAVIN1Q6NZI2 390 aaKnown RBP12.26□□□□□ -0.45
TRAF4-202ENST00000262396 PIM3Q86V86 326 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 HEATR4Q86WZ0 1026 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 ARHGAP12Q8IWW6 846 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 NPWQ8N729 165 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 ZDHHC1Q8WTX9 485 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 ECHDC3Q96DC8 303 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 WBP1Q96G27 269 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 NUDCD1Q96RS6 583 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 BPIFA3Q9BQP9 254 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 NT5MQ9NPB1 228 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 AIPL1Q9NZN9 384 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 IP6K2Q9UHH9 426 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 ANAPC7Q9UJX3 599 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 HEMK1Q9Y5R4 338 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-202ENST00000262396 BZW2Q9Y6E2 419 aaKnown RBP12.26□□□□□ -0.45
TRAF4-202ENST00000262396 RNF215Q9Y6U7 377 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 PMS2P1A4D2B8 440 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CDRT15L2A8MXV6 281 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 GOLGA6L19H0YKK7 550 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 K7ENP7 123 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 DDX3XO00571 662 aaKnown RBP eCLIP12.25□□□□□ -0.457e-11■■■■■ 50.8
TRAF4-202ENST00000262396 ZIC2O95409 532 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-202ENST00000262396 ASMTLO95671 621 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 HOXC4P09017 264 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-202ENST00000262396 PNLIPP16233 465 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CTPS1P17812 591 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 ETV3P41162 512 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 NOP2P46087 812 aaKnown RBP12.25□□□□□ -0.45
TRAF4-202ENST00000262396 MAXP61244 160 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CLN3Q13286 438 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 LY6DQ14210 128 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CERCAMQ5T4B2 595 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 INO80CQ6PI98 192 aaPredicted RBP12.25□□□□□ -0.45
TRAF4-202ENST00000262396 SLC30A9Q6PML9 568 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CLEC14AQ86T13 490 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 GPR156Q8NFN8 814 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CPLX3Q8WVH0 158 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 VOPP1Q96AW1 172 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 AHCYL2Q96HN2 611 aaKnown RBP12.25□□□□□ -0.45
TRAF4-202ENST00000262396 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 LGR4Q9BXB1 951 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 NOD2Q9HC29 1040 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 APPL1Q9UKG1 709 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 PCDHGA7Q9Y5G6 932 aa12.25□□□□□ -0.45
TRAF4-202ENST00000262396 A0A1W2PNU3 283 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 A0A1W2PQM1 296 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 J3QKU1 62 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 MYO1FO00160 1098 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 TRAFD1O14545 582 aaPredicted RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CASC3O15234 703 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 NUDT21O43809 227 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 HEXIM1O94992 359 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 RARAP10276 462 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CCNB1P14635 433 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CCKBRP32239 447 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 TRIM23P36406 574 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 PRKCIP41743 596 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 MAZP56270 477 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 DPYSQ14117 519 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CNGA3Q16281 694 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 DPYSL2Q16555 572 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 ODF2Q5BJF6 829 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 RALGPS1Q5JS13 557 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 APTXQ7Z2E3 356 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 SPRED1Q7Z699 444 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 ARFGAP1Q8N6T3 406 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CCDC112Q8NEF3 446 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CCL4L1Q8NHW4 92 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 AP2M1Q96CW1 435 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 FAM117AQ9C073 453 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 CDH19Q9H159 772 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 STN1Q9H668 368 aaKnown RBP12.24□□□□□ -0.45
TRAF4-202ENST00000262396 SUFUQ9UMX1 484 aa12.24□□□□□ -0.45
TRAF4-202ENST00000262396 PSMD11O00231 422 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 C1QL1O75973 258 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 CPNE6O95741 557 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 LIPCP11150 499 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 ITIH1P19827 911 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 ACTR1BP42025 376 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 PDX1P52945 283 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 OR1D5P58170 312 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 ACTR1AP61163 376 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 CDK3Q00526 305 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 TIGD7Q6NT04 549 aaPredicted RBP12.23□□□□□ -0.45
TRAF4-202ENST00000262396 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 Q6ZVL8 140 aa12.23□□□□□ -0.45
TRAF4-202ENST00000262396 MARK2Q7KZI7 788 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms