RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 PFKFB4Q16877 469 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 UGT3A2Q3SY77 523 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 VPS26BQ4G0F5 336 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC22A9Q8IVM8 553 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 TTC9BQ8N6N2 239 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 OR13C4Q8NGS5 318 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SERPINB11Q96P15 392 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC25A23Q9BV35 468 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 RBM38Q9H0Z9 239 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 EPB41L1Q9H4G0 881 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 ETAA1Q9NY74 926 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 TMEM181Q9P2C4 612 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 SARDHQ9UL12 918 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 ACTL7AQ9Y615 435 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 LAMA3Q16787 3333 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 H3BMM5 538 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 CELF2O95319 508 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 UGT1A6P19224 532 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 MAPRE2Q15555 327 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 OR4D1Q15615 310 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 RAP1GAP2Q684P5 730 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF683Q8IZ20 524 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 PTGR2Q8N8N7 351 aaPredicted RBP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 CANT1Q8WVQ1 401 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 RANBP9Q96S59 729 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 GMIPQ9P107 970 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 EGFL7Q9UHF1 273 aa16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 CNOT6Q9ULM6 557 aaKnown RBP16.38■□□□□ 0.21
TM9SF1-201ENST00000261789 ARHGEF37A1IGU5 675 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 H3BSA7 217 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MUSKO15146 869 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 SRP72O76094 671 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 CDK14O94921 469 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 GOT2P00505 430 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ATXN1LP0C7T5 689 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ATP6V1B2P21281 511 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 GPX3P22352 226 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 PCSK6P29122 969 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 TBX4P57082 545 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MGAT3Q09327 533 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 CAPRIN1Q14444 709 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 CHERPQ8IWX8 916 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 UMODL1-AS1Q8N2C9 162 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ARRDC2Q8TBH0 407 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 DIS3LQ8TF46 1054 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 PPP1R2P1Q96PQ5 205 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ZYG11BQ9C0D3 744 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MID1IP1Q9NPA3 183 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 VPS45Q9NRW7 570 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MAP10Q9P2G4 905 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 DOCK4Q8N1I0 1966 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 A0A0J9YYE9 177 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 A0A0U1RQF3 1178 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 TCRBV3S1A0A5B6 114 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 PIP5K1BO14986 540 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC7A4O43246 635 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 CD1DP15813 335 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 HTR7P34969 479 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ACVRL1P37023 503 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 RGS2P41220 211 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 HERVK_113P63132 956 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 APOFQ13790 326 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MAPRE1Q15691 268 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 FBXL22Q6P050 247 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 DDIASQ8IXT1 998 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 TMIGD2Q96BF3 282 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC39A13Q96H72 371 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 SUSD3Q96L08 255 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 RPL10LQ96L21 214 aaKnown RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF597Q96LX8 424 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 TMEM79Q9BSE2 394 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 ERVK-6Q9BXR3 956 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 PRDM5Q9NQX1 630 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 NDUFA13Q9P0J0 144 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 TLR6Q9Y2C9 796 aa16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.37■□□□□ 0.21
TM9SF1-201ENST00000261789 FAM149AA5PLN7 773 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 SOCS2O14508 198 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 TPST1O60507 370 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 HSPA13P48723 471 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 TAF1CQ15572 869 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 DHFR2Q86XF0 187 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 HIC2Q96JB3 615 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 ZFRQ96KR1 1074 aaKnown RBP16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 SEMA3CQ99985 751 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 CAAP1Q9H8G2 361 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 AURKCQ9UQB9 309 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 CCDC162PA2VCL2 907 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 AKAP10O43572 662 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF623O75123 536 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 LINC00032P0C843 101 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms