RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TK1P04183 234 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 POLBP06746 335 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 CNTFP26441 200 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 EPS15P42566 896 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 VAMP2P63027 116 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 UBE3AQ05086 875 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 CUL4BQ13620 913 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 KEAP1Q14145 624 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 ASIC2Q16515 512 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 ZNF484Q5JVG2 852 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 HEPHL1Q6MZM0 1159 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 C18orf65Q6ZTR6 163 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 SERPINA11Q86U17 422 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 WDR5BQ86VZ2 330 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 TMEM57Q8N5G2 664 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 NUDCD2Q8WVJ2 157 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 HERVK_113Q902F9 699 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 MASTLQ96GX5 879 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 MAELQ96JY0 434 aaKnown RBP5.09□□□□□ -1.59
TRA2B-201ENST00000259043 RMI1Q9H9A7 625 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 JMJD4Q9H9V9 463 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 UBN1Q9NPG3 1134 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 SEL1LQ9UBV2 794 aa5.09□□□□□ -1.59
TRA2B-201ENST00000259043 CEP290O15078 2479 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TARSL2A2RTX5 802 aaKnown RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 C17orf102A2RUQ5 167 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 EME2A4GXA9 379 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 B9A039 149 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 CCNT1O60563 726 aaKnown RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 KRT38O76015 456 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 CAMTA2O94983 1202 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 MBD4O95243 580 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 METTL18O95568 372 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 CENPBP07199 599 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 BDNFP23560 247 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 THPOP40225 353 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 MTNR1AP48039 350 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 CLCNKBP51801 687 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 DSCR9P59020 149 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 SLC12A1Q13621 1099 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TMTC1Q8IUR5 882 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 GPC2Q8N158 579 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 GOLGA1Q92805 767 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 COG8Q96MW5 612 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TEFMQ96QE5 360 aaKnown RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 IFT27Q9BW83 186 aa5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TMX4Q9H1E5 349 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 TLR8Q9NR97 1041 aaKnown RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 FBXO2Q9UK22 296 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-201ENST00000259043 SIPA1L3O60292 1781 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 RBBP6Q7Z6E9 1792 aaKnown RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 DDTLA6NHG4 134 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 SAC3D1A6NKF1 404 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 SEPT4O43236 478 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 LIASO43766 372 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 FGF3P11487 239 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 GJC1P36383 396 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 RBM5P52756 815 aaKnown RBP eCLIP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 MPP1Q00013 466 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 ANKRD1Q15327 319 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 SHBQ15464 509 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 FSCBQ5H9T9 825 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 C1orf141Q5JVX7 400 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 TMEM268Q5VZI3 342 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 C8orf82Q6P1X6 216 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 TICAM2Q86XR7 235 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 DCP1BQ8IZD4 617 aaKnown RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 USP38Q8NB14 1042 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 LINS1Q8NG48 757 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 HDAC2Q92769 488 aaKnown RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 RILPL2Q969X0 211 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 GGA3Q9NZ52 723 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 GRHL1Q9NZI5 618 aa5.07□□□□□ -1.6
TRA2B-201ENST00000259043 MKI67P46013 3256 aaKnown RBP5.07□□□□□ -1.6
TRA2B-201ENST00000259043 A6NLC8 198 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 VWA5AO00534 786 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 GLUD1P00367 558 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 ENO3P13929 434 aaPredicted RBP5.06□□□□□ -1.6
TRA2B-201ENST00000259043 RXRAP19793 462 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 DPP6P42658 865 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 TNNT2P45379 298 aaPredicted RBP5.06□□□□□ -1.6
TRA2B-201ENST00000259043 KCNJ4P48050 445 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 GLUD2P49448 558 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 PDLIM4P50479 330 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 CDH12P55289 794 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 BYSLQ13895 437 aaKnown RBP5.06□□□□□ -1.6
TRA2B-201ENST00000259043 MAP3K21Q5TCX8 1036 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 USP50Q70EL3 339 aaPredicted RBP5.06□□□□□ -1.6
TRA2B-201ENST00000259043 CPOQ8IVL8 374 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 CLIP4Q8N3C7 705 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 TSPYL6Q8N831 410 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 CNBD1Q8NA66 436 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 PCYOX1LQ8NBM8 494 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 SETD9Q8NE22 299 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 CEP70Q8NHQ1 597 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 SLC35F5Q8WV83 523 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 SEZ6LQ9BYH1 1024 aa5.06□□□□□ -1.6
TRA2B-201ENST00000259043 GLIS2Q9BZE0 524 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms