RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TRMT11Q7Z4G4 463 aaKnown RBP17.51■□□□□ 0.39
SRSF1-201ENST00000258962 STRA8Q7Z7C7 330 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 KIAA0907Q7Z7F0 614 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SFTPA1Q8IWL2 248 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 CNTN4Q8IWV2 1026 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■□□□ 13.8
SRSF1-201ENST00000258962 BLOC1S5Q8TDH9 187 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 KCNV2Q8TDN2 545 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 RPL10LQ96L21 214 aaKnown RBP17.51■□□□□ 0.39
SRSF1-201ENST00000258962 FAM86C1Q9NVL1 165 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 NKIRAS1Q9NYS0 192 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 HS3ST2Q9Y278 367 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 KCTD3Q9Y597 815 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 SPO11Q9Y5K1 396 aa17.51■□□□□ 0.39
SRSF1-201ENST00000258962 KIAA1549LQ6ZVL6 1849 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 ITGA2BP08514 1039 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 PAMP19021 973 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 CSNK1DP48730 415 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 NEK3P51956 506 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 SEC24CP53992 1094 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 CSE1LP55060 971 aaKnown RBP17.5■□□□□ 0.39
SRSF1-201ENST00000258962 METTL3Q86U44 580 aaKnown RBP17.5■□□□□ 0.39
SRSF1-201ENST00000258962 ADIPOR2Q86V24 386 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF513Q8N8E2 541 aaPredicted RBP17.5■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF557Q8N988 423 aaPredicted RBP17.5■□□□□ 0.39
SRSF1-201ENST00000258962 LPCAT1Q8NF37 534 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 APOPT1Q96IL0 206 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 SMIM14Q96QK8 99 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 CCDC134Q9H6E4 229 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 ZSCAN32Q9NX65 697 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.391e-7■■■□□ 14.6
SRSF1-201ENST00000258962 TXNDC16Q9P2K2 825 aa17.5■□□□□ 0.39
SRSF1-201ENST00000258962 EVLQ9UI08 416 aaPredicted RBP17.5■□□□□ 0.39
SRSF1-201ENST00000258962 FZD6O60353 706 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 KLF8O95600 359 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-201ENST00000258962 ASMTLO95671 621 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 ALDOAP04075 364 aaKnown RBP17.49■□□□□ 0.39
SRSF1-201ENST00000258962 KIR2DL1P43626 348 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-201ENST00000258962 ARSDP51689 593 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 LIMK2P53671 638 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 ACVR1Q04771 509 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 DNAJC3Q13217 504 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 DMC1Q14565 340 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 E2F5Q15329 346 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 EOGTQ5NDL2 527 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 SDE2Q6IQ49 451 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 TXNDC5Q8NBS9 432 aaKnown RBP17.49■□□□□ 0.39
SRSF1-201ENST00000258962 OR6K2Q8NGY2 324 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 BRSK1Q8TDC3 778 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 UCMAQ8WVF2 138 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 VOPP1Q96AW1 172 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 RMDN1Q96DB5 314 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 SGSM3Q96HU1 749 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 EPN3Q9H201 632 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 TNKS2Q9H2K2 1166 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 C12orf65Q9H3J6 166 aaKnown RBP17.49■□□□□ 0.39
SRSF1-201ENST00000258962 RABEP2Q9H5N1 569 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 C2orf42Q9NWW7 574 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 NSMCE4AQ9NXX6 385 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 STARD13Q9Y3M8 1113 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 PCDHGA2Q9Y5H1 932 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 ARL5AQ9Y689 179 aa17.49■□□□□ 0.39
SRSF1-201ENST00000258962 TIMM44O43615 452 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 ZWINTO95229 277 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 GABRB3P28472 473 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 ABCG1P45844 678 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 PTPRCAPQ14761 206 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 QPCTQ16769 361 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 C22orf39Q6P5X5 142 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 NLRP9Q7RTR0 991 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 DENND6AQ8IWF6 608 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 CAMKK1Q8N5S9 505 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 TCP10LQ8TDR4 215 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 MKS1Q9NXB0 559 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 SLC17A7Q9P2U7 560 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 SLC25A13Q9UJS0 675 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 GRID1Q9ULK0 1009 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 MMP17Q9ULZ9 603 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
SRSF1-201ENST00000258962 PRRT4C9JH25 899 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 K7ESF4 209 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CCL22O00626 93 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 TPP1O14773 563 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 AURKAO14965 403 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 BUD23O43709 281 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PIGNO95427 931 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 IGSF6O95976 241 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 HOXA6P31267 233 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 GKP32189 559 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 SLC8A1P32418 973 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 SPRP35270 261 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 SLC1A2P43004 574 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF140P52738 457 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PTPRRQ15256 657 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 GEN1Q17RS7 908 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CDHR3Q6ZTQ4 885 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CAMK1DQ8IU85 385 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms