RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CSH1P0DML2 217 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 CSH2P0DML3 217 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 FGFR1P11362 822 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 IL1R1P14778 569 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 TNNI3P19429 210 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 GMPSP49915 693 aaPredicted RBP4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SCN1BQ07699 218 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SEZ6Q53EL9 994 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 XKR6Q5GH73 641 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 FAM131AQ6UXB0 335 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SSU72Q9NP77 194 aaKnown RBP4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SNTG2Q9NY99 539 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MYOFQ9NZM1 2061 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 FAM86C2PA6NEL3 165 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MCIDASD6RGH6 385 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 E5RJQ4 531 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 AZIN1O14977 448 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 OR10H2O60403 315 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 OR10H3O60404 316 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SERPINA1P01009 418 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 PSMA1P25786 263 aaKnown RBP4.81□□□□□ -1.64
RC3H1-201ENST00000258349 BUD31P41223 144 aaPredicted RBP4.81□□□□□ -1.64
RC3H1-201ENST00000258349 GALNT3Q14435 633 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 ERICH5Q6P6B1 374 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 HEXDCQ8WVB3 486 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 FCGR1BQ92637 280 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SPATC1LQ9H0A9 340 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SNX15Q9NRS6 342 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SEMA3GQ9NS98 782 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.81□□□□□ -1.642e-7■■■■□ 26.6
RC3H1-201ENST00000258349 FAM50BQ9Y247 325 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 FPGTO14772 594 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 ACSL4O60488 711 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MT-CO1P00395 513 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 LINC00032P0C843 101 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 NR2F1P10589 423 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MYBPC3Q14896 1274 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MIIPQ5JXC2 388 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 SLC9A9Q8IVB4 645 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MAP4K3Q8IVH8 894 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 DAW1Q8N136 415 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 MEIOBQ8N635 442 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 DNAJC1Q96KC8 554 aaKnown RBP4.81□□□□□ -1.64
RC3H1-201ENST00000258349 B3GALT6Q96L58 329 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 PHF12Q96QT6 1004 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 GULP1Q9UBP9 304 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 UNC13CQ8NB66 2214 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 ARID1AO14497 2285 aa4.81□□□□□ -1.64
RC3H1-201ENST00000258349 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LRRC10BA6NIK2 292 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MAGEB3O15480 346 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FADS2O95864 444 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 THRBP10828 461 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 IGFBP5P24593 272 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 HTR7P34969 479 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C3orf67Q6ZVT6 689 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 USP43Q70EL4 1123 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 DNAJB7Q7Z6W7 309 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TRAPPC5Q8IUR0 188 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TMEM192Q8IY95 271 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CNTD1Q8N815 330 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 LEMD2Q8NC56 503 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SYTL5Q8TDW5 730 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ACOT12Q8WYK0 555 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLC35C1Q96A29 364 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 GSDMCQ9BYG8 508 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 IL25Q9H293 177 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TLL2Q9Y6L7 1015 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PXDNQ92626 1479 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TPSB2P20231 275 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 POLR2JP52435 117 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 BST1Q10588 318 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TPSAB1Q15661 275 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PTPRNQ16849 979 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RBFAQ8N0V3 343 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FAR1Q8WVX9 515 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TP53INP1Q96A56 240 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ERMAPQ96PL5 475 aaPredicted RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 ZDHHC6Q9H6R6 413 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 VPS45Q9NRW7 570 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 PIH1D1Q9NWS0 290 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MRTO4Q9UKD2 239 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SCN1AP35498 2009 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 H3BNH8 94 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 SLC28A2O43868 658 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TM7SF2O76062 418 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C9P02748 559 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CATP04040 527 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RBL1P28749 1068 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 CDK9P50750 372 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 FKBP1AP62942 108 aaKnown RBP4.8□□□□□ -1.64
RC3H1-201ENST00000258349 MFSD10Q14728 455 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C6orf52Q5T4I8 152 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C12orf56Q8IXR9 622 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 TNS4Q8IZW8 715 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 RAB2BQ8WUD1 216 aa4.8□□□□□ -1.64
RC3H1-201ENST00000258349 C17orf50Q8WW18 174 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms