RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMCO5AQ8N6Q1 288 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM161BQ96MY7 647 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 RMI1Q9H9A7 625 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 KCNK1O00180 336 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 JMJD7P0C870 316 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ATP5F1P24539 256 aaPredicted RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 NOMO1Q15155 1222 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ABHD13Q7L211 337 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 GPR156Q8NFN8 814 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 KLHL32Q96NJ5 620 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 ELAC2Q9BQ52 826 aaKnown RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 DNAJC11Q9NVH1 559 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 CALML5Q9NZT1 146 aa13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
PRPF38A-201ENST00000257181 TMEM150CB9EJG8 249 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ALOX15BO15296 676 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 KDELR3O43731 214 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 STBD1O95210 358 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 TYRP14679 529 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ALDH9A1P49189 494 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SHROOM1Q2M3G4 852 aaPredicted RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 PRR23CQ6ZRP0 262 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 CERS2Q96G23 380 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 DUSP23Q9BVJ7 150 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 PNMA6AP0CW24 399 aaPredicted RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 IGFALSP35858 605 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 CSKP41240 450 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 DMWDQ09019 674 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ARCQ7LC44 396 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SNX20Q7Z614 316 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 AGGF1Q8N302 714 aaeCLIP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 TMEM145Q8NBT3 493 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 MIPEPQ99797 713 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 EEF1B2P24534 225 aaKnown RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 DNASE1L2Q92874 299 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 APOL2Q9BQE5 337 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 MRPL46Q9H2W6 279 aaKnown RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SERTAD3Q9UJW9 196 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ACSL5Q9ULC5 683 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 ANGPT4Q9Y264 503 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SLC25A12O75746 678 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SOX30O94993 753 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 RABIFP47224 123 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 HADHBP55084 474 aaKnown RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 BTKQ06187 659 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SMAD4Q13485 552 aaKnown RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 MYLK3Q32MK0 819 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 KLHDC10Q6PID8 442 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 TMEM110Q86TL2 294 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 CYP4X1Q8N118 509 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 C12orf29Q8N999 325 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 PRRG4Q9BZD6 226 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SDHAF3Q9NRP4 125 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 AURKCQ9UQB9 309 aa13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
PRPF38A-201ENST00000257181 SEC22BO75396 215 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 ENDOUP21128 410 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 CXCL12P48061 93 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PTPRNQ16849 979 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 BEND6Q5SZJ8 279 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 FAAH2Q6GMR7 532 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM126BQ8IXS8 530 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM120BQ96EK7 910 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 APOPT1Q96IL0 206 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PCYOX1Q9UHG3 505 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PIAS3Q9Y6X2 628 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 A0A096LPK6 155 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 DGKIO75912 1065 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 HOXC12P31275 282 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 TNFRSF4P43489 277 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 LMAN2Q12907 356 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SF1Q15637 639 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 IL17AQ16552 155 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 KLHL26Q53HC5 615 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 TRIM40Q6P9F5 258 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 UBE2R2Q712K3 238 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 UNC5BQ8IZJ1 945 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 CAMKVQ8NCB2 501 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 SELENOMQ8WWX9 145 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 BORCS6Q96GS4 357 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 THUMPD3Q9BV44 507 aaKnown RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 PDE7BQ9NP56 450 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 UBP1Q9NZI7 540 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 A0A087X0B3 334 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 NCF1BA6NI72 391 aaPredicted RBP13.41□□□□□ -0.26
PRPF38A-201ENST00000257181 NCF1CA8MVU1 366 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms