RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 OGDHLQ9ULD0 1010 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 MYOCOSA0A1B0GUC4 107 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 SNTNA6NMZ2 147 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 PECAM1P16284 738 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 AVPR1BP47901 424 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 RPIAP49247 311 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 BNC1Q01954 994 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 TMEM192Q8IY95 271 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 NUS1Q96E22 293 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 PRKD2Q9BZL6 878 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 PACSIN3Q9UKS6 424 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 HNRNPRO43390 633 aaKnown RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 KLHL18O94889 574 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 GIMD1P0DJR0 217 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 C1DQ13901 141 aaKnown RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 ARMC4Q5T2S8 1044 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 HECTD2Q5U5R9 776 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 FAM110BQ8TC76 370 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 ARHGAP28Q9P2N2 729 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 C2CD2Q9Y426 696 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 POLR3HQ9Y535 204 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 COPS8Q99627 209 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 HEPHQ9BQS7 1158 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 ZSCAN5CA6NGD5 496 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 TFEBP19484 476 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 CYP3A5P20815 502 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 AQP1P29972 269 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 GP5P40197 560 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 PTPN9P43378 593 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 RNF144AP50876 292 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 CCNIQ14094 377 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 RASA2Q15283 850 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 KAT2AQ92830 837 aa16.92■□□□□ 0.3
SORT1-201ENST00000256637 SPRTNQ9H040 489 aaPredicted RBP16.92■□□□□ 0.3
SORT1-201ENST00000256637 THRAP10827 490 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 LIX1Q8N485 282 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 TCP10LQ8TDR4 215 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 VPS4AQ9UN37 437 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 PSMD11O00231 422 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 EOMESO95936 686 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 GZMAP12544 262 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 MATKP42679 507 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 GTF2BQ00403 316 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 PON2Q15165 354 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 ZSWIM7Q19AV6 140 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 DUPD1Q68J44 220 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 RNFT2Q96EX2 444 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 IL22Q9GZX6 179 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 CDH7Q9ULB5 785 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 ARL5AQ9Y689 179 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 KPNA5O15131 536 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 ELP6Q0PNE2 266 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 HSPB3Q12988 150 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
SORT1-201ENST00000256637 GANQ9H2C0 597 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 STK39Q9UEW8 545 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 CDC40O60508 579 aaKnown RBP eCLIP16.91■□□□□ 0.3
SORT1-201ENST00000256637 CHRNA1P02708 482 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 RYKP34925 604 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 RCN1Q15293 331 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 TRPM8Q7Z2W7 1104 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 KIAA2013Q8IYS2 634 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 UBR7Q8N806 425 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 DNAJB14Q8TBM8 379 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 TEKT5Q96M29 485 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 ARMCX1Q9P291 453 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 CFAP73A6NFT4 308 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 AGXTP21549 392 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 HNRNPH2P55795 449 aaKnown RBP16.91■□□□□ 0.3
SORT1-201ENST00000256637 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 CCT8L2Q96SF2 557 aa16.91■□□□□ 0.3
SORT1-201ENST00000256637 LTA4HP09960 611 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 PRG2P13727 222 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CASRP41180 1078 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 ACTR1BP42025 376 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 ACTR1AP61163 376 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 TAF5Q15542 800 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 TIGD5Q53EQ6 642 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 TMEM126BQ8IUX1 230 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 RIBC1Q8N443 379 aaPredicted RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 CCSER2Q9H7U1 834 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SOX13Q9UN79 622 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 F7P08709 466 aaPredicted RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 ITGAXP20702 1163 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 GSTM5P46439 218 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 TRIM25Q14258 630 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 METTL3Q86U44 580 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 DEFB107AQ8IZN7 70 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.31e-9■■■■■ 31.6
SORT1-201ENST00000256637 NAE1Q13564 534 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 EID3Q8N140 333 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 SPATA22Q8NHS9 363 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 NUSAP1Q9BXS6 441 aaKnown RBP16.9■□□□□ 0.3
SORT1-201ENST00000256637 A6NL46 340 aa16.9■□□□□ 0.3
SORT1-201ENST00000256637 DNM1LO00429 736 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms