RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 UNC50Q53HI1 259 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 MRNIPQ6NTE8 343 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 PIM3Q86V86 326 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 PCYOX1LQ8NBM8 494 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 OR52K2Q8NGK3 314 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 TBATAQ96M53 351 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 APPL1Q9UKG1 709 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 RAMP2O60895 175 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 ETS2P15036 469 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 TSPAN8P19075 237 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 FDXRP22570 491 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 CDKL1Q00532 357 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 MYBPC1Q00872 1141 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 ACVR1Q04771 509 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 RALGDSQ12967 914 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 EML3Q32P44 896 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PARP15Q460N3 678 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 FBXL22Q6P050 247 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 CYHR1Q6ZMK1 362 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF598Q86UK7 904 aaKnown RBP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 IGSF8Q969P0 613 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PBXIP1Q96AQ6 731 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PTERQ96BW5 349 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 ROPN1LQ96C74 230 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 DUS3LQ96G46 650 aaKnown RBP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 EFHD1Q9BUP0 239 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 GMIPQ9P107 970 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PCDHGB4Q9UN71 923 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 MTF2Q9Y483 593 aaPredicted RBP16.43■□□□□ 0.22
HOXD3-201ENST00000249440 KCTD3Q9Y597 815 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 PCDHGB5Q9Y5G0 923 aa16.43■□□□□ 0.22
HOXD3-201ENST00000249440 TCRBV3S1A0A5B6 114 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 INPPL1O15357 1258 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 CD3EAPO15446 510 aaKnown RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 SLC4A1P02730 911 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 HSPA8P11142 646 aaKnown RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 CYBAP13498 195 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 HLA-DPA1P20036 260 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 ETFBP38117 255 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 GPR15P49685 360 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 USP46P62068 366 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 LSAMPQ13449 338 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 RAP1GAP2Q684P5 730 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 C8orf82Q6P1X6 216 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 RAB44Q7Z6P3 723 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 GPR150Q8NGU9 434 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 SEMA3CQ99985 751 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 SEMA6AQ9H2E6 1030 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 POPDC3Q9HBV1 291 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 BBIP1A8MTZ0 92 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 OR6B1O95007 311 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 MT-CO1P00395 513 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 GOT2P00505 430 aaKnown RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 FGF1P05230 155 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 FGF4P08620 206 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 SLC7A1P30825 629 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 GRK4P32298 578 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 BTG3Q14201 252 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 SLC5A9Q2M3M2 681 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 MAP7D1Q3KQU3 841 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 UGT3A2Q3SY77 523 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 IYDQ6PHW0 289 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 LAYNQ6UX15 382 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 RYBPQ8N488 228 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 BLOC1S5Q8TDH9 187 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 LRTOMTQ8WZ04 291 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 RPRD1AQ96P16 312 aaPredicted RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 PRPF18Q99633 342 aaKnown RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 FBRSL1Q9HCM7 1045 aaKnown RBP16.42■□□□□ 0.22
HOXD3-201ENST00000249440 DNAJC15Q9Y5T4 150 aa16.42■□□□□ 0.22
HOXD3-201ENST00000249440 DRGXA6NNA5 263 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ASGR1P07306 291 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 PSMC3P17980 439 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 OR1E1P30953 314 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 CDH13P55290 713 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 SH3BP2P78314 561 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 SERINC3Q13530 473 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 MAP7Q14244 749 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 GK3PQ14409 553 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 TRIP4Q15650 581 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 NRF1Q16656 503 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 GEN1Q17RS7 908 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 KIF19Q2TAC6 998 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 USP41Q3LFD5 358 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 GLB1LQ6UWU2 654 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF280BQ86YH2 543 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 MIB1Q86YT6 1006 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 HERC6Q8IVU3 1022 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 PTGR2Q8N8N7 351 aaPredicted RBP16.41■□□□□ 0.22
HOXD3-201ENST00000249440 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 RHEBL1Q8TAI7 183 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 EXT2Q93063 718 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 FEM1CQ96JP0 617 aa16.41■□□□□ 0.22
HOXD3-201ENST00000249440 C3orf30Q96M34 536 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms