RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SCML2Q9UQR0 700 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 A0A0U1RQS6 177 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 ZNF839A8K0R7 811 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 NR5A2O00482 541 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 TRIM24O15164 1050 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 SLC7A4O43246 635 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 NRP2O60462 931 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 SLC2A3P11169 496 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 ZNF26P17031 533 aaPredicted RBP25.57■■□□□ 1.68
RAB40C-201ENST00000248139 OR1E1P30953 314 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 CYTH1Q15438 398 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 SLC5A9Q2M3M2 681 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 NADK2Q4G0N4 442 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 HERC6Q8IVU3 1022 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 GRIN3AQ8TCU5 1115 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 CCDC126Q96EE4 140 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 CYP2S1Q96SQ9 504 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 NOL11Q9H8H0 719 aaKnown RBP25.57■■□□□ 1.68
RAB40C-201ENST00000248139 MID1IP1Q9NPA3 183 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 TMEM248Q9NWD8 314 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.57■■□□□ 1.68
RAB40C-201ENST00000248139 EPS15L1Q9UBC2 864 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 FAM50BQ9Y247 325 aa25.57■■□□□ 1.68
RAB40C-201ENST00000248139 A0A0D9SEW6 157 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 SLC12A8A0AV02 714 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 SNUPNO95149 360 aaKnown RBP25.56■■□□□ 1.68
RAB40C-201ENST00000248139 HTR7P34969 479 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 NDST2P52849 883 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 MYO1HQ8N1T3 1032 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 ARHGAP18Q8N392 663 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 DLG3Q92796 817 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 UPF1Q92900 1129 aaKnown RBP eCLIP25.56■■□□□ 1.682e-7■■■■■ 32.6
RAB40C-201ENST00000248139 SPAG4Q9NPE6 437 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 UTP6Q9NYH9 597 aaKnown RBP25.56■■□□□ 1.68
RAB40C-201ENST00000248139 RAB26Q9ULW5 256 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 PCDHB8Q9UN66 801 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 SCN4AP35499 1836 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 WASH4PA8MWX3 477 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 RAMP2O60895 175 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 TIPRLO75663 272 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 CDK14O94921 469 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 CYBAP13498 195 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 CD1DP15813 335 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 CKMT2P17540 419 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 CAPRIN1Q14444 709 aaKnown RBP25.56■■□□□ 1.68
RAB40C-201ENST00000248139 VPS26BQ4G0F5 336 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 C6orf10Q5SRN2 563 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 DDIASQ8IXT1 998 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 TRPC4APQ8TEL6 797 aa25.56■■□□□ 1.68
RAB40C-201ENST00000248139 RPL10LQ96L21 214 aaKnown RBP25.56■■□□□ 1.68
RAB40C-201ENST00000248139 UBA6A0AVT1 1052 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 CD3EAPO15446 510 aaKnown RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 INHBEP58166 350 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 CRHR2Q13324 411 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 PTPRRQ15256 657 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 SLC14A2Q15849 920 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 UGT3A2Q3SY77 523 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 CLLU1OSQ5K130 101 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 ZNF598Q86UK7 904 aaKnown RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 AFAP1L2Q8N4X5 818 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 PRICKLE1Q96MT3 831 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 CRISPLD1Q9H336 500 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 Q9H521 79 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 HCSTQ9UBK5 93 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 EGFL7Q9UHF1 273 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 CROTQ9UKG9 612 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 IKZF3Q9UKT9 509 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 PIP5K1BO14986 540 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 WISP3O95389 354 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 TYMPP19971 482 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 TAF10Q12962 218 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 SLC22A9Q8IVM8 553 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 FBXO32Q969P5 355 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 PPWD1Q96BP3 646 aaKnown RBP25.55■■□□□ 1.68
RAB40C-201ENST00000248139 FAR2Q96K12 515 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 NSMCE3Q96MG7 304 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 RANBP9Q96S59 729 aa25.55■■□□□ 1.68
RAB40C-201ENST00000248139 NCF1BA6NI72 391 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-201ENST00000248139 NCF1CA8MVU1 366 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-201ENST00000248139 GLP2RO95838 553 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 LINC00032P0C843 101 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 NCF1P14598 390 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-201ENST00000248139 UGT1A6P19224 532 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 RPL10P27635 214 aaKnown RBP25.54■■□□□ 1.68
RAB40C-201ENST00000248139 RASAL3Q86YV0 1011 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 ESAMQ96AP7 390 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 PPP1R2P1Q96PQ5 205 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 CCSER2Q9H7U1 834 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 MARCH2Q9P0N8 246 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 SUCOQ9UBS9 1254 aaKnown RBP25.54■■□□□ 1.68
RAB40C-201ENST00000248139 KCNQ1P51787 676 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 HMBOX1Q6NT76 420 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 MSANTD2Q6P1R3 559 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 SCIMPQ6UWF3 145 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 LRRC49Q8IUZ0 686 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 SPC25Q9HBM1 224 aa25.54■■□□□ 1.68
RAB40C-201ENST00000248139 LOC285095A0A1B0GVY8 99 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 VILLO15195 856 aa25.53■■□□□ 1.68
RAB40C-201ENST00000248139 AP1G1O43747 822 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms