RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 BHMTQ93088 406 aa23.28■■□□□ 1.32
MSX2-201ENST00000239243 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.27■■□□□ 1.32
MSX2-201ENST00000239243 PIGNO95427 931 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 CTNNB1P35222 781 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 BMPR1AP36894 532 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 EPHB1P54762 984 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 ERVFC1P60507 584 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 USP4Q13107 963 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 SEMA3AQ14563 771 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 METTL21CQ5VZV1 264 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 SLC22A9Q8IVM8 553 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 AARSD1Q9BTE6 412 aaKnown RBP23.27■■□□□ 1.32
MSX2-201ENST00000239243 SLC46A2Q9BY10 475 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 CCDC68Q9H2F9 335 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 POMKQ9H5K3 350 aa23.27■■□□□ 1.32
MSX2-201ENST00000239243 F8W8V4 182 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 HDAC3O15379 428 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 CCL16O15467 120 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 FZD6O60353 706 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 MAGEC3Q8TD91 643 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 CNDP1Q96KN2 507 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 CXXC1Q9P0U4 656 aaPredicted RBP23.27■■□□□ 1.31
MSX2-201ENST00000239243 RWDD3Q9Y3V2 267 aa23.27■■□□□ 1.31
MSX2-201ENST00000239243 MATN2O00339 956 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 STX7O15400 261 aaKnown RBP23.26■■□□□ 1.31
MSX2-201ENST00000239243 TLL1O43897 1013 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 ENO1P06733 434 aaKnown RBP23.26■■□□□ 1.31
MSX2-201ENST00000239243 CHRNGP07510 517 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 CSNK1DP48730 415 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 RPL26P61254 145 aaKnown RBP23.26■■□□□ 1.31
MSX2-201ENST00000239243 ARMC12Q5T9G4 340 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 SEL1L3Q68CR1 1132 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 ZNF549Q6P9A3 640 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 TREML1Q86YW5 311 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 APCDD1Q8J025 514 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 EFHBQ8N7U6 833 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 TXNDC5Q8NBS9 432 aaKnown RBP23.26■■□□□ 1.31
MSX2-201ENST00000239243 PHOSPHO2Q8TCD6 241 aa23.26■■□□□ 1.31
MSX2-201ENST00000239243 H7C0S8 307 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 NDUFS3O75489 264 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 WFS1O76024 890 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 IPO13O94829 963 aaKnown RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 GJA1P17302 382 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 ABL2P42684 1182 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TMEM240Q5SV17 173 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PLPP4Q5VZY2 271 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 ARHGAP24Q8N264 748 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 CCNYL1Q8N7R7 359 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 SLC22A17Q8WUG5 538 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 ANKRD49Q8WVL7 239 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 UNKQ9C0B0 810 aaKnown RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 SYTL2Q9HCH5 934 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PCDH10Q9P2E7 1040 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PCDHB9Q9Y5E1 797 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 SLC4A7Q9Y6M7 1214 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 SPECC1L-ADORA2AF8WAN1 911 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PENKP01210 267 aaPredicted RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 SLC4A1P02730 911 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 MPSTP25325 297 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 SLC8A1P32418 973 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TTPAP49638 278 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 CLCN4P51793 760 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 EPHA5P54756 1037 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 LMAN2Q12907 356 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PDAP1Q13442 181 aaKnown RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 AARS2Q5JTZ9 985 aaKnown RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 GPR158Q5T848 1215 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TRIM67Q6ZTA4 783 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TPGS1Q6ZTW0 290 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TMPRSS6Q8IU80 811 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TEX9Q8N6V9 391 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 PNPLA1Q8N8W4 532 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 SGF29Q96ES7 293 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 MYO19Q96H55 970 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 MAGEE1Q9HCI5 957 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 TLR9Q9NR96 1032 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 ABCB8Q9NUT2 735 aa23.25■■□□□ 1.31
MSX2-201ENST00000239243 HELZP42694 1942 aaKnown RBP23.25■■□□□ 1.31
MSX2-201ENST00000239243 PRR5-ARHGAP8B1AHC4 643 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 MT-CO1P00395 513 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 TFEBP19484 476 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 MNAT1P51948 309 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 PLK1P53350 603 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 ARHGAP8P85298 464 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 UBE3AQ05086 875 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 ATXN7L2Q5T6C5 722 aaPredicted RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 SUGP1Q8IWZ8 645 aaKnown RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 KIRREL3Q8IZU9 778 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 TTC30BQ8N4P2 665 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 LPGAT1Q92604 370 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 MCUR1Q96AQ8 359 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 MIPEPQ99797 713 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 POLR3BQ9NW08 1133 aaPredicted RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 TAS2R1Q9NYW7 299 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 MTCL1Q9Y4B5 1905 aaKnown RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 UBA6A0AVT1 1052 aaPredicted RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 HIDE1A8MVS5 230 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 CHUKO15111 745 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 PGLSO95336 258 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 ZNF37AP17032 561 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms