RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 IRF8Q02556 426 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 CYP2U1Q7Z449 544 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 C2orf69Q8N8R5 385 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 COLEC11Q9BWP8 271 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 CXCL8P10145 99 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 AXLP30530 894 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 OMPP47874 163 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 ZNF410Q86VK4 478 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 MIB1Q86YT6 1006 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 LPGAT1Q92604 370 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 TAAR1Q96RJ0 339 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 POLR1DQ9Y2S0 133 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 HOXA2O43364 376 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 CCNFP41002 786 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 CYP4F2P78329 520 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 CYP4F3Q08477 520 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 USP4Q13107 963 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 TMEM44Q2T9K0 475 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 PPM1LQ5SGD2 360 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 AHSA2Q719I0 299 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 LAPTM4BQ86VI4 370 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 C11orf24Q96F05 449 aaPredicted RBP8.23□□□□□ -1.09
APOB-201ENST00000233242 SYT15Q9BQS2 421 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 ASMTP46597 345 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 UBR7Q8N806 425 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 C9orf43Q8TAL5 461 aaPredicted RBP8.23□□□□□ -1.09
APOB-201ENST00000233242 PPP1R14AQ96A00 147 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 AASSQ9UDR5 926 aa8.23□□□□□ -1.09
APOB-201ENST00000233242 RBM47A0AV96 593 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 QSOX1O00391 747 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 GPR182O15218 404 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 B3GAT3O94766 335 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 POLR2JP52435 117 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 FSTL1Q12841 308 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 TMEM86AQ8N2M4 240 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ITPKCQ96DU7 683 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 C1GALT1C1Q96EU7 318 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FAM172BPA6NC97 362 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 RFXANKO14593 260 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 AKAP8O43823 692 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF806P0C7X5 589 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CYP2A6P11509 494 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 RORCP51449 518 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 PPP3CAQ08209 521 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SULT1C3Q6IMI6 304 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF280DQ6N043 979 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SLCO2A1Q92959 643 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 PANX1Q96RD7 426 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SMURF2Q9HAU4 748 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CBX4O00257 560 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FGF1P05230 155 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF24P17028 368 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ITGB6P18564 788 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FGFR2P21802 821 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 PAX3P23760 479 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CYP1B1Q16678 543 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 C15orf59Q2T9L4 293 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 SCUBE3Q8IX30 993 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF557Q8N988 423 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF317Q96PQ6 595 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 PXMP2Q9NR77 195 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 WASF2Q9Y6W5 498 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 A0A1W2PPM1 405 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 GSTT2BP0CG30 244 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SNAPC2Q13487 334 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 KCTD4Q8WVF5 259 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ZDHHC15Q96MV8 337 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CEP41Q9BYV8 373 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ABCG2Q9UNQ0 655 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CRYL1Q9Y2S2 319 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 TARBP1Q13395 1621 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 MYH8P13535 1937 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SLC12A8A0AV02 714 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 KLF11O14901 512 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 BMP7P18075 431 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SUZ12Q15022 739 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 AADACL2Q6P093 401 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 TUBA1CQ9BQE3 449 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CKLFQ9UBR5 152 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 VWA7Q9Y334 891 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 E5RJQ4 531 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CYP4B1P13584 511 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 OR1E1P30953 314 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 POLR2LP62875 67 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 RPL38P63173 70 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 AKIRIN2Q53H80 203 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 NCCRP1Q6ZVX7 275 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 PARK7Q99497 189 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 LHX5Q9H2C1 402 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 THP07101 528 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 HNRNPLP14866 589 aaKnown RBP eCLIP8.22□□□□□ -1.099e-20■■□□□ 14.3
APOB-201ENST00000233242 ALG2Q9H553 416 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 TBX10O75333 385 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 UGT2B4P06133 528 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms