RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 AGLP35573 1532 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 FAM149AA5PLN7 773 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DNM1LO00429 736 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 PAGE1O75459 146 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 LPOP22079 712 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 GPR1P46091 355 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 SLC20A2Q08357 652 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 REP15Q6BDI9 236 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 PAGE2Q7Z2X7 111 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 HTRA1Q92743 480 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 BCL2L14Q9BZR8 327 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 TMEM39AQ9NV64 488 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 DNAJC28Q9NX36 388 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 AGO1Q9UL18 857 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 GPSM3Q9Y4H4 160 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 C2P06681 752 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 BUD31P41223 144 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 FKBP1AP62942 108 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 FUT2Q10981 343 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
NEK4-201ENST00000233027 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 FNDC11Q9BVV2 318 aa13.39□□□□□ -0.27
NEK4-201ENST00000233027 CABYRO75952 493 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 TM7SF2O76062 418 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 IKBIPQ70UQ0 350 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 FAM35AQ86V20 835 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 BSNDQ8WZ55 320 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 TMEM138Q9NPI0 162 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 TIMM22Q9Y584 194 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 MROH1Q8NDA8 1641 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 H0Y858 1186 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 LCA5LO95447 670 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 CDK18Q07002 472 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 VPS26BQ4G0F5 336 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 RFWD3Q6PCD5 774 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 EEF1AKMT1Q8WVE0 214 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 DGCR14Q96DF8 476 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 CHRAC1Q9NRG0 131 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 AGPSO00116 658 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 TFECO14948 347 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 MPP1Q00013 466 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 MFSD5Q6N075 450 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 ANKS1BQ7Z6G8 1248 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 ADAMTSL2Q86TH1 951 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 SMYD1Q8NB12 490 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 RPL26L1Q9UNX3 145 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 GUCY1B2O75343 617 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 CST3P01034 146 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 RPL4P36578 427 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 JAM2P57087 298 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 KRT74Q7RTS7 529 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 FAM220AQ7Z4H9 259 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 VANGL1Q8TAA9 524 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 PIH1D2Q8WWB5 315 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 AHCYL2Q96HN2 611 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 PPM1MQ96MI6 270 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 UROC1Q96N76 676 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 SUV39H1O43463 412 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 SLC28A2O43868 658 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 PGK1P00558 417 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 IFNA16P05015 189 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 NR4A1P22736 598 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 BRCC3P46736 316 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 MMP14P50281 582 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 OLFML1Q6UWY5 402 aa13.38□□□□□ -0.27
NEK4-201ENST00000233027 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 PPIEQ9UNP9 301 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 RBMX2Q9Y388 322 aaKnown RBP13.38□□□□□ -0.27
NEK4-201ENST00000233027 A0A1W2PQH9 124 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 AMHP03971 560 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CCNYL3P0C7X3 344 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ITPKAP23677 461 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 XIAPP98170 497 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 GBE1Q04446 702 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CARTPTQ16568 116 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 PLA2G4EQ3MJ16 856 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 SSR3Q9UNL2 185 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 HDCP19113 662 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CDKN2BP42772 138 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ATP6V0D1P61421 351 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 COPZ1P61923 177 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 RAPSNQ13702 412 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 GPR158Q5T848 1215 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms