RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MAPK15Q8TD08 544 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 TEKT5Q96M29 485 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 ADI1Q9BV57 179 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 GBA3Q9H227 469 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 RAB26Q9ULW5 256 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 FAM72CH0Y354 149 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 KCNH1O95259 989 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 NADKO95544 446 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-201ENST00000226574 EDN1P05305 212 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 GNA12Q03113 381 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 FAM72AQ5TYM5 149 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-201ENST00000226574 FAM72DQ6L9T8 149 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 PRMT9Q6P2P2 845 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 ANKRD46Q86W74 232 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 FAM72BQ86X60 149 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 HTRA1Q92743 480 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 MED8Q96G25 268 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 EXD2Q9NVH0 621 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 LEF1Q9UJU2 399 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-201ENST00000226574 FZD10Q9ULW2 581 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 NENFQ9UMX5 172 aa13.76□□□□□ -0.21
NFKB1-201ENST00000226574 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-201ENST00000226574 SLC22A3O75751 556 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 H6PDO95479 791 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CD52P31358 61 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 ICAM3P32942 547 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NNMTP40261 264 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 MTPNP58546 118 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 DEFA1P59665 94 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 DEFA3P59666 94 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CDK18Q07002 472 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 SNX17Q15036 470 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TCEAL1Q15170 157 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 BROXQ5VW32 411 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 C9orf131Q5VYM1 1079 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 FCRL3Q96P31 734 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CDK15Q96Q40 435 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NDEL1Q9GZM8 345 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 C20orf27Q9GZN8 174 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 PLK2Q9NYY3 685 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 PTTG2Q9NZH5 202 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TLL2Q9Y6L7 1015 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 MGAT4DA6NG13 374 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 KLF11O14901 512 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NOBOXO60393 691 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 MBL2P11226 248 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 DARSP14868 501 aaKnown RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 ITGALP20701 1170 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TSNQ15631 228 aaKnown RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TTLL9Q3SXZ7 439 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 UGT3A1Q6NUS8 523 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CAPSLQ8WWF8 208 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 LINGO1Q96FE5 620 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 PCYT2Q99447 389 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 POLR3HQ9Y535 204 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 PCDHGC4Q9Y5F7 938 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NPEPPSL1A6NEC2 478 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 C22orf31O95567 290 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TBX18O95935 607 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 ZNF540Q8NDQ6 660 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 SLC35F5Q8WV83 523 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 MAGED4Q96JG8 741 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 GPR21Q99679 349 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CCDC106Q9BWC9 280 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 ADGRE3Q9BY15 652 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 UGT2B28Q9BY64 529 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 FANCEQ9HB96 536 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 GIMAP4Q9NUV9 329 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 OPTCQ9UBM4 332 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 E7ESA3 106 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 F8W810 466 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CCNIQ14094 377 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 POM121L1PQ3SYA9 428 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 GPRIN3Q6ZVF9 776 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 POC5Q8NA72 575 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 OR4L1Q8NH43 312 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 CEP44Q9C0F1 390 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-201ENST00000226574 SLC8A2Q9UPR5 921 aa13.75□□□□□ -0.21
NFKB1-201ENST00000226574 NRCAMQ92823 1304 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms