RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ERLIN1O75477 346 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 ALDH1A2O94788 518 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 POLBP06746 335 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 GSTA2P09210 222 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 XPAP23025 273 aaPredicted RBP14.05□□□□□ -0.16
SEC61B-201ENST00000223641 NMBRP28336 390 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 HOXA6P31267 233 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 CXCL12P48061 93 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 TPMTP51580 245 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 CCR3P51677 355 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 STC1P52823 247 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 PMS2P54278 862 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 GPX6P59796 221 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 FAM193AP78312 1265 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 CNGA3Q16281 694 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 KYNUQ16719 465 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 SPANXN3Q5MJ09 141 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 LRRC66Q68CR7 880 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 ESRP1Q6NXG1 681 aaKnown RBP14.05□□□□□ -0.16
SEC61B-201ENST00000223641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
SEC61B-201ENST00000223641 LIPIQ6XZB0 460 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 UNC5AQ6ZN44 842 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 CACUL1Q86Y37 369 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 OR13J1Q8NGT2 312 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 HMGB4Q8WW32 186 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 TTC25Q96NG3 672 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 HHIPQ96QV1 700 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 TRIM56Q9BRZ2 755 aaKnown RBP14.05□□□□□ -0.16
SEC61B-201ENST00000223641 NLE1Q9NVX2 485 aaPredicted RBP14.05□□□□□ -0.16
SEC61B-201ENST00000223641 SAMD15Q9P1V8 674 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 MAD1L1Q9Y6D9 718 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 RPS6KL1Q9Y6S9 549 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 PLXND1Q9Y4D7 1925 aa14.05□□□□□ -0.16
SEC61B-201ENST00000223641 SPAG6O75602 509 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 RNASEH2AO75792 299 aaKnown RBP14.04□□□□□ -0.16
SEC61B-201ENST00000223641 APBB3O95704 486 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 C1QAP02745 245 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 C1SP09871 688 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 ACADMP11310 421 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 GM2AP17900 193 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 SSTR1P30872 391 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 ADPRHP54922 357 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 SEMG2Q02383 582 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 CRYMQ14894 314 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 AGERQ15109 404 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 UAP1Q16222 522 aaPredicted RBP14.04□□□□□ -0.16
SEC61B-201ENST00000223641 SKIDA1Q1XH10 827 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 UBAP2Q5T6F2 1119 aaKnown RBP14.04□□□□□ -0.16
SEC61B-201ENST00000223641 ANO7Q6IWH7 933 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 NEK5Q6P3R8 708 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 KIAA1324Q6UXG2 1013 aaKnown RBP14.04□□□□□ -0.16
SEC61B-201ENST00000223641 C3orf62Q6ZUJ4 267 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 TECPR1Q7Z6L1 1165 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 PALM2Q8IXS6 379 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 OR4K2Q8NGD2 314 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 SGSM3Q96HU1 749 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 GPR63Q9BZJ6 419 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 MOCS1Q9NZB8 636 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 NFKBIL1Q9UBC1 381 aaPredicted RBP14.04□□□□□ -0.16
SEC61B-201ENST00000223641 SLC2A6Q9UGQ3 507 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 GGT7Q9UJ14 662 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 NCKAP1Q9Y2A7 1128 aa14.04□□□□□ -0.16
SEC61B-201ENST00000223641 RGSL1A5PLK6 1076 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 A8MX80 341 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 RIPK2O43353 540 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ABHD2P08910 425 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ARNTP27540 789 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 HADHAP40939 763 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ARCN1P48444 511 aaKnown RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 SPINT3P49223 89 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 LIG3P49916 1009 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ARSDP51689 593 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PTPN5P54829 565 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 SEPT6Q14141 434 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ARHGEF7Q14155 803 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PTPRCAPQ14761 206 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 KIAA0930Q6ICG6 404 aaPredicted RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ZNF449Q6P9G9 518 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 FBXO38Q6PIJ6 1188 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 CES3Q6UWW8 571 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 CYP2U1Q7Z449 544 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 OR13C4Q8NGS5 318 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 GSDMBQ8TAX9 411 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 DTX3LQ8TDB6 740 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PBXIP1Q96AQ6 731 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 ZNF669Q96BR6 464 aaPredicted RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 CDKN2AIPNLQ96HQ2 116 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 DNAJC1Q96KC8 554 aaKnown RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 COQ10AQ96MF6 247 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 SGK2Q9HBY8 427 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PREBQ9HCU5 417 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PRMT8Q9NR22 394 aaPredicted RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.03□□□□□ -0.16
SEC61B-201ENST00000223641 PLXNA2O75051 1894 aa14.03□□□□□ -0.16
SEC61B-201ENST00000223641 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms