RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 C8orf59Q8N0T1 100 aaPredicted RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 OR4K2Q8NGD2 314 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 VMP1Q96GC9 406 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 CDH19Q9H159 772 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 RPL26L1Q9UNX3 145 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 KIAA1551Q9HCM1 1747 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 FAM155BO75949 473 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 SLC25A14O95258 325 aaPredicted RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 CTSEP14091 401 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 RHOQP17081 205 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 MYL12AP19105 171 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 NTSP30990 170 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 L1CAMP32004 1257 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 IFNGR2P38484 337 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 HNF4AP41235 474 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 CLCNKBP51801 687 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 RIPK1Q13546 671 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 SPIDRQ14159 915 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 DHDDSQ86SQ9 333 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 LUZP2Q86TE4 346 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 ULK2Q8IYT8 1036 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 AADATQ8N5Z0 425 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 C3orf18Q9UK00 162 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 C2CD4BA6NLJ0 364 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 MED26O95402 600 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 VNN1O95497 513 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 LINC00032P0C843 101 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 COL6A2P12110 1019 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 PKMP14618 531 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 ST13P50502 369 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 TNK2Q07912 1038 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 GNA13Q14344 377 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 C16orf72Q14CZ0 275 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 PARP15Q460N3 678 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 XKR6Q5GH73 641 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 RNASEH2BQ5TBB1 312 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 MAB21L3Q8N8X9 362 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 MFSD3Q96ES6 412 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 ZNF317Q96PQ6 595 aaPredicted RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 FZD8Q9H461 694 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 STMN3Q9NZ72 180 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 PRPF19Q9UMS4 504 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 URB1O60287 2271 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 AP2A1O95782 977 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 NDST3O95803 873 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 VAV1P15498 845 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 CYP3A5P20815 502 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 DGCR6Q14129 220 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 ARMC4Q5T2S8 1044 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 CLNKQ7Z7G1 428 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 CUZD1Q86UP6 607 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 DDX1Q92499 740 aaKnown RBP11.52□□□□□ -0.56
NOD1-201ENST00000222823 ACBD6Q9BR61 282 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 RHBGQ9H310 441 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 CYLDQ9NQC7 956 aa11.52□□□□□ -0.56
NOD1-201ENST00000222823 MYBPHLA2RUH7 354 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 SLC28A1O00337 649 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 IDO1P14902 403 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ANPEPP15144 967 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 CDC25CP30307 473 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 FEN1P39748 380 aaKnown RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 GLUD2P49448 558 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 SLC7A2P52569 658 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 TIGD2Q4W5G0 525 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 CEP78Q5JTW2 689 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 C6orf89Q6UWU4 347 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 GPR156Q8NFN8 814 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 IRGQQ8WZA9 623 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 MPP4Q96JB8 637 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 QKIQ96PU8 341 aaKnown RBP eCLIP11.52□□□□□ -0.57
NOD1-201ENST00000222823 DGCR6LQ9BY27 220 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 GRIP2Q9C0E4 1043 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 PCDH12Q9NPG4 1184 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 RPS6KA6Q9UK32 745 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 A0A1B0GW55 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 UBXN8O00124 270 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 CAPN15O75808 1086 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 SMPD1P17405 629 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 ATP6V1C1P21283 382 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 TLX1P31314 330 aaPredicted RBP11.52□□□□□ -0.57
NOD1-201ENST00000222823 BNIP1Q12981 228 aa11.52□□□□□ -0.57
NOD1-201ENST00000222823 C1orf220Q5T0J3 134 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms