RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 MOCOSQ96EN8 888 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PTCD3Q96EY7 689 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 TM6SF2Q9BZW4 377 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 DRC3Q9H069 523 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 STN1Q9H668 368 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 ACSS2Q9NR19 701 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 INTS6Q9UL03 887 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 RWDD3Q9Y3V2 267 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
RABGGTA-201ENST00000216840 SLC4A1P02730 911 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 KRT16P08779 473 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 PLK1P53350 603 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 NSL1Q96IY1 281 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 RILPQ96NA2 401 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 TUBB6Q9BUF5 446 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 INTS10Q9NVR2 710 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 POLR3BQ9NW08 1133 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 DNAJC28Q9NX36 388 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 ARMCX1Q9P291 453 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 LNPEPQ9UIQ6 1025 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 TRAFD1O14545 582 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 GRM6O15303 877 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 CYBBP04839 570 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 RHOP08100 348 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 EPCAMP16422 314 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 LAMA2P24043 3122 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 PMLP29590 882 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 NAGLUP54802 743 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 RCN2Q14257 317 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 SLC5A9Q2M3M2 681 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 PIM3Q86V86 326 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 USP13Q92995 863 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 SGF29Q96ES7 293 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 CDH19Q9H159 772 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 FAM96AQ9H5X1 160 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 ABCB8Q9NUT2 735 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 HACD3Q9P035 362 aa17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 MTF2Q9Y483 593 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-201ENST00000216840 C5orf67F2Z3F1 127 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 HNRNPCL1O60812 293 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 CCDC22O60826 627 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 PGLSO95336 258 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 CHRNGP07510 517 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 SLC26A3P40879 764 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 CCR10P46092 362 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 IDH3AP50213 366 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 RASSF2P50749 326 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 PFKPQ01813 784 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 USP4Q13107 963 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 CAMK1DQ8IU85 385 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 OR6K2Q8NGY2 324 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 MYO19Q96H55 970 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 EVLQ9UI08 416 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 FKBPLQ9UIM3 349 aa17.23■□□□□ 0.35
RABGGTA-201ENST00000216840 CAPN14A8MX76 684 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 MGRN1O60291 552 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ZNF821O75541 412 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 SERPINA6P08185 405 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ATP5F1P24539 256 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 HOXA9P31269 272 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 CSNK1DP48730 415 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 SUOXP51687 545 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 EPHB1P54762 984 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ACAP2Q15057 778 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ARMC12Q5T9G4 340 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 KLC3Q6P597 504 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 PIH1D2Q8WWB5 315 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 LPGAT1Q92604 370 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 AARSD1Q9BTE6 412 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ILKAPQ9H0C8 392 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 BPIFA1Q9NP55 256 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 RAP2CQ9Y3L5 183 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 A0A0U1RQS6 177 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 STX7O15400 261 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 PRAMEF12O95522 483 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 RBP1P09455 135 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 MYOGP15173 224 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 PTPN4P29074 926 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 CDKN1CP49918 316 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ALDH18A1P54886 795 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 DNAJB13P59910 316 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 SLC20A2Q08357 652 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ASPHQ12797 758 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 ARL13AQ5H913 290 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 PITRM1Q5JRX3 1037 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 VWA5B1Q5TIE3 1220 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 TMEM25Q86YD3 366 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 TREML1Q86YW5 311 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 LSMEM2Q8N112 164 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 TCF12Q99081 682 aa17.22■□□□□ 0.35
RABGGTA-201ENST00000216840 TLE6Q9H808 572 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms