RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 OGFOD2Q6N063 350 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 XYLT1Q86Y38 959 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 LZTR1Q8N653 840 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 GIPC3Q8TF64 312 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MRPL57Q9BQC6 102 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MMADHCQ9H3L0 296 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 HMG20AQ9NP66 347 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 LEF1Q9UJU2 399 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 VPS4AQ9UN37 437 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SAP18O00422 153 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 AZIN1O14977 448 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PRKCGP05129 697 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 CTNNB1P35222 781 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SEC13P55735 322 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 TAS2R41P59536 307 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 POU5F1Q01860 360 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PRKG2Q13237 762 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 NAB1Q13506 487 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM98AQ8NCA5 519 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PIH1D2Q8WWB5 315 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SGK2Q9HBY8 427 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 RSL24D1Q9UHA3 163 aaKnown RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MYPNQ86TC9 1320 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 A0A075B6Q4 140 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 STBD1O95210 358 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 MT-CYBP00156 380 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 HIST1H2ABP04908 130 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PRKCIP41743 596 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 GABRB2P47870 512 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 DSC2Q02487 901 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 IL18R1Q13478 541 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 UBE2R2Q712K3 238 aaPredicted RBP13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 HIST3H2AQ7L7L0 130 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 PAGE2Q7Z2X7 111 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 HIST1H2ACQ93077 130 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 FCRL4Q96PJ5 515 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
TGFBR3-201ENST00000212355 STATHP02808 62 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ADSSP30520 456 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 HSDL1Q3SXM5 330 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 C9orf57Q5W0N0 161 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 GINS4Q9BRT9 223 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 EXO5Q9H790 373 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ASF1AQ9Y294 204 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 SLIT1O75093 1534 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 TOR1BO14657 336 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 SCN2BO60939 215 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 WNT3AP56704 352 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 SNRPD1P62314 119 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 DSELQ8IZU8 1212 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 RBM15BQ8NDT2 890 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 S100A13Q99584 98 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 FNDC11Q9BVV2 318 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 PMF1-BGLAPU3KQ54 211 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NOBOXO60393 691 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NMBRP28336 390 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 IRF9Q00978 393 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 APBB2Q92870 758 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 MCRS1Q96EZ8 462 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NCKAP1Q9Y2A7 1128 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NR2E1Q9Y466 385 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 UBIAD1Q9Y5Z9 338 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ZW10O43264 779 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ACSL4O60488 711 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NOL4O94818 638 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 TRABD2AQ86V40 505 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ECHDC2Q86YB7 292 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ING5Q8WYH8 240 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 FANCEQ9HB96 536 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ETAA1Q9NY74 926 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 EVLQ9UI08 416 aaPredicted RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 TRAF6Q9Y4K3 522 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 CPSF4LA6NMK7 179 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 H3BSH0 61 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 METTL18O95568 372 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 TNFRSF8P28908 595 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 GDF10P55107 478 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 DCTN2Q13561 401 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 SLCO6A1Q86UG4 719 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 KLHL23Q8NBE8 558 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 ATL1Q8WXF7 558 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 NMUR1Q9HB89 426 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms