RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZSCAN32Q9NX65 697 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 PRKAG1P54619 331 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 SERHL2Q9H4I8 314 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 SERHLQ9NQF3 203 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 PNMA8CA0A1B0GUJ8 204 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 SPAM1P38567 509 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 GBE1Q04446 702 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 UBE2R2Q712K3 238 aaPredicted RBP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 PCED1BQ96HM7 432 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 MED26O95402 600 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 EPORP19235 508 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 GNA12Q03113 381 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 CACNG1Q06432 222 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 CBX2Q14781 532 aaPredicted RBP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 ATAT1Q5SQI0 421 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 EIF3MQ7L2H7 374 aaKnown RBP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 C10orf107Q8IVU9 208 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 FAM20CQ8IXL6 584 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 OR52L1Q8NGH7 329 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 COL26A1Q96A83 441 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 C3orf18Q9UK00 162 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 PIPSLA2A3N6 862 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 OR10H2O60403 315 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 EDF1O60869 148 aaKnown RBP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 ALG11Q2TAA5 492 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 NEK10Q6ZWH5 1172 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 CHSY3Q70JA7 882 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 C16orf62Q7Z3J2 963 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 NLGN2Q8NFZ4 835 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 DNAJC1Q96KC8 554 aaKnown RBP23.18■■□□□ 1.3
TARBP1-201ENST00000040877 FERD3LQ96RJ6 166 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 SLC9A8Q9Y2E8 581 aa23.18■■□□□ 1.3
TARBP1-201ENST00000040877 CENPXA8MT69 81 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 RNF225M0QZC1 329 aaPredicted RBP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 MATN3O15232 486 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 ATG13O75143 517 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 C2P06681 752 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 CPSF6Q16630 551 aaKnown RBP eCLIP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 ARHGEF4Q9NR80 690 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 FAM25AB3EWG3 89 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 FAM25CB3EWG5 89 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 FAM25GB3EWG6 89 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 OR4K2Q8NGD2 314 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 CENPIQ92674 756 aaPredicted RBP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 INTS7Q9NVH2 962 aaKnown RBP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 Q9Y3F1 56 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 DRD4P21917 467 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 GRIA3P42263 894 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 VARS2Q5ST30 1063 aaKnown RBP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 PWWP2AQ96N64 755 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 RBPJLQ9UBG7 517 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 BTRCQ9Y297 605 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 TRAF6Q9Y4K3 522 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 DAOAP59103 153 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 SLC10A6Q3KNW5 377 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 TRAF7Q6Q0C0 670 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 SPATA19Q7Z5L4 167 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 C17orf64Q86WR6 236 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 ANKRD49Q8WVL7 239 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 SDCBP2Q9H190 292 aa23.17■■□□□ 1.3
TARBP1-201ENST00000040877 TRIT1Q9H3H1 467 aaKnown RBP23.17■■□□□ 1.3
TARBP1-201ENST00000040877 SERPINB7O75635 380 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 PIGRP01833 764 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 HIST1H2ABP04908 130 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 FAM163BP0C2L3 166 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 ST13P50502 369 aaKnown RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 STX4Q12846 297 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 HIST3H2AQ7L7L0 130 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 TMEM139Q8IV31 216 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 HIST1H2ACQ93077 130 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 SH3GL2Q99962 352 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 ZNF180Q9UJW8 692 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 C2CD4BA6NLJ0 364 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 ELF3P78545 371 aaPredicted RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 SLC25A3Q00325 362 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 HECTD2Q5U5R9 776 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 GCNT7Q6ZNI0 430 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 RBM23Q86U06 439 aaKnown RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 RAB23Q9ULC3 237 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 NR2F1P10589 423 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 Q96MT0 163 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 PANX1Q96RD7 426 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 LRMDAQ9H2I8 198 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 PCDH12Q9NPG4 1184 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 NOCTQ9UK39 431 aaKnown RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 R3HDM2Q9Y2K5 976 aaKnown RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 CAPN15O75808 1086 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 TSPAN19P0C672 248 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 PHYKPLQ8IUZ5 450 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 RTL3Q8N8U3 475 aaKnown RBP23.16■■□□□ 1.3
TARBP1-201ENST00000040877 MIEF2Q96C03 454 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 OR10H1Q9Y4A9 318 aa23.16■■□□□ 1.3
TARBP1-201ENST00000040877 HNRNPDQ14103 355 aaKnown RBP23.15■■□□□ 1.3
TARBP1-201ENST00000040877 LRRC57Q8N9N7 239 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 OLFM1Q99784 485 aa23.15■■□□□ 1.3
TARBP1-201ENST00000040877 ERVK-5Q9HDB9 667 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms