RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 TEX26Q8N6G2 289 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 TTC9Q92623 222 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 TMEM74Q96NL1 305 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 MCCC1Q96RQ3 725 aaPredicted RBP15.9■□□□□ 0.14
ERCC1-201ENST00000013807 TMEM168Q9H0V1 697 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 WDR26Q9H7D7 661 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 NOD2Q9HC29 1040 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 ETNK2Q9NVF9 386 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 SIRPGQ9P1W8 387 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 RCOR3Q9P2K3 495 aaPredicted RBP15.9■□□□□ 0.14
ERCC1-201ENST00000013807 B4GALT6Q9UBX8 382 aa15.9■□□□□ 0.14
ERCC1-201ENST00000013807 PRSS38A1L453 326 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 NVLO15381 856 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 HEXIM1O94992 359 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 RPLP0P05388 317 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 TCF4P15884 667 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 INHBCP55103 352 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 SLC25A11Q02978 314 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 DPTQ07507 201 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 CLN3Q13286 438 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF235Q14590 738 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 NR1D2Q14995 579 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 CNGA3Q16281 694 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 C14orf28Q4W4Y0 310 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 RAB11FIP2Q7L804 512 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 NLRP8Q86W28 1048 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 CCNJLQ8IV13 435 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 RAVER1Q8IY67 606 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 BBS5Q8N3I7 341 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF843Q8N446 348 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 FAM46DQ8NEK8 389 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 B3GNT4Q9C0J1 378 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 STRADBQ9C0K7 418 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 MRPL40Q9NQ50 206 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 TRNAU1APQ9NX07 287 aaKnown RBP15.89■□□□□ 0.13
ERCC1-201ENST00000013807 MYO1AQ9UBC5 1043 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 PCDHGC4Q9Y5F7 938 aa15.89■□□□□ 0.13
ERCC1-201ENST00000013807 TENM4Q6N022 2769 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 ASH1LQ9NR48 2969 aaKnown RBP15.88■□□□□ 0.13
ERCC1-201ENST00000013807 FZD6O60353 706 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 FUCA1P04066 466 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 CEACAM5P06731 702 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 CCNB1P14635 433 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 LHCGRP22888 699 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 VIPR1P32241 457 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 SERPINB6P35237 376 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 UGT1A5P35504 534 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 CFHR1Q03591 330 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 ACOX1Q15067 660 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 CLPPQ16740 277 aaPredicted RBP15.88■□□□□ 0.13
ERCC1-201ENST00000013807 SMTNL2Q2TAL5 461 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 ARHGAP40Q5TG30 622 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 MARC1Q5VT66 337 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 TXNRD3NBQ6F5E7 133 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 ALG1LQ6GMV1 187 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF438Q7Z4V0 828 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 SPRED1Q7Z699 444 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 TAF8Q7Z7C8 310 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 FBXO39Q8N4B4 442 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 FATE1Q969F0 183 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 IQCDQ96DY2 449 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 NUS1Q96E22 293 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 DTD2Q96FN9 168 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 SCARF2Q96GP6 870 aaPredicted RBP15.88■□□□□ 0.13
ERCC1-201ENST00000013807 FRMD8Q9BZ67 464 aaPredicted RBP15.88■□□□□ 0.13
ERCC1-201ENST00000013807 PCDH18Q9HCL0 1135 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 CYP4F12Q9HCS2 524 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 LRIT1Q9P2V4 623 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 IP6K2Q9UHH9 426 aa15.88■□□□□ 0.13
ERCC1-201ENST00000013807 TLN1Q9Y490 2541 aaKnown RBP15.87■□□□□ 0.13
ERCC1-201ENST00000013807 TTC24A2A3L6 582 aaPredicted RBP15.87■□□□□ 0.13
ERCC1-201ENST00000013807 PGLSO95336 258 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 SERPING1P05155 500 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 CYP1A2P05177 515 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 CYP2A6P11509 494 aaPredicted RBP15.87■□□□□ 0.13
ERCC1-201ENST00000013807 MMP13P45452 471 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 ARSEP51690 589 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 TRAF2Q12933 501 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 TECPR1Q7Z6L1 1165 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 NRROSQ86YC3 692 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 CCL4L1Q8NHW4 92 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 KIAA1524Q8TCG1 905 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 PIH1D2Q8WWB5 315 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 THAP2Q9H0W7 228 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 PHPT1Q9NRX4 125 aaPredicted RBP15.87■□□□□ 0.13
ERCC1-201ENST00000013807 AMACRQ9UHK6 382 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 ATXN7L1Q9ULK2 861 aaPredicted RBP15.87■□□□□ 0.13
ERCC1-201ENST00000013807 SLC17A4Q9Y2C5 497 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 RNF215Q9Y6U7 377 aa15.87■□□□□ 0.13
ERCC1-201ENST00000013807 SDK2Q58EX2 2172 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 NPIPB15A6NHN6 443 aaPredicted RBP15.86■□□□□ 0.13
ERCC1-201ENST00000013807 A8MX80 341 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 EFSO43281 561 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 CPP00450 1065 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 SERPINC1P01008 464 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 FGF1P05230 155 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 CES1P23141 567 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms