RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 GsnP13020 780 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cct8P42932 548 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gucy2eP52785 1108 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Polr2iP60898 125 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stx1bP61264 288 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Flot2Q60634 428 aaKnown RBP13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Bcar1Q61140 874 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 MafkQ61827 156 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cyp4b1Q64462 511 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Nrg1Q6DR99 700 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ces2bQ6PDB7 556 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ric8bQ80XE1 520 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 TufmQ8BFR5 452 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zfp438Q8BFX2 798 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sec22cQ8BXT9 303 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmc7Q8C428 726 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 PvrQ8K094 408 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lurap1lQ8K2P1 221 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Plcl2Q8K394 1128 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Oit3Q8R4V5 546 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc35c2Q8VCX2 364 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gramd1aQ8VEF1 722 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fubp1Q91WJ8 651 aaKnown RBP13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pcdha11Q91Y19 950 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cybrd1Q925G2 290 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Q9CR55 154 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cyb5r1Q9DB73 305 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Nt5cQ9JM14 200 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 CpqQ9WVJ3 470 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Morc1Q9WVL5 950 aa13.46□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm36028A0A0U1RPM1 299 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr1200A2ATJ4 336 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vmn2r121A2BE32 847 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dennd5bA2RSQ0 1274 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Arhgap36B1AUC7 590 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sgo2bJ3QMK1 1167 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm3739L7N296 216 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cd151O35566 253 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sh3pxd2aO89032 1124 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Serpina3kP07759 418 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Il1rl1P14719 567 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 InaP46660 501 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gli1P47806 1111 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Hcrtr1P58307 416 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 CtscP97821 462 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fmo5P97872 533 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm4951Q3UED7 406 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dyrk2Q5U4C9 599 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stmnd1Q6P3A1 279 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cyp2r1Q6VVW9 501 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr698Q7TRN4 311 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rbm22Q8BHS3 420 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ticam2Q8BJQ4 232 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cstf2tQ8C7E9 632 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Celf3Q8CIN6 465 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vps39Q8R5L3 886 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr30Q8VGD8 315 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Unc50Q9CQ61 259 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 PudpQ9D5U5 234 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Isca2Q9DCB8 154 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Doc2gQ9ESN1 387 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trem1Q9JKE2 230 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Akap8lQ9R0L7 642 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Syt5Q9R0N5 386 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdh17Q9R100 827 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 FlgP11088 336 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Agtr2P35374 363 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tap2P36371 702 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gpx3P46412 226 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Impdh1P50096 514 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tuba1cP68373 449 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pip5k1bP70181 539 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mgat3Q10470 538 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ptcd3Q14C51 685 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pik3r6Q3U6Q4 756 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 BtrcQ3ULA2 605 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ifi47Q61635 420 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Jak3Q62137 1100 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Casc4Q6P2L7 435 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mfn1Q811U4 741 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdh7Q8BM92 785 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sept10Q8C650 452 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ipo13Q8K0C1 963 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stk32cQ8QZV4 488 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Timd2Q8R183 305 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mmgt2Q8R3L0 123 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 HnrnprQ8VHM5 632 aaKnown RBP13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stard13Q923Q2 1113 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Acer3Q9D099 267 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tor1bQ9ER41 336 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tuba8Q9JJZ2 449 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mrpl40Q9Z2Q5 206 aa13.45□□□□□ -0.26
Nup88-201ENSMUST00000035283 Shroom3Q9QXN0 1986 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm28363A0A087WQW2 129 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm12248A0A1W2P8B8 313 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Eif2b3B1AUN2 452 aaKnown RBP13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm8113E0CXS8 587 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vmn2r120E9PX34 856 aa13.44□□□□□ -0.26
Nup88-201ENSMUST00000035283 Serpine3E9Q6A2 401 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 42.6 ms