RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FOXD2O60548 495 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 RHDQ02161 417 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 FSCN1Q16658 493 aaKnown RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 AHI1Q8N157 1196 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 HBEGFQ99075 208 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 EFHD1Q9BUP0 239 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SLC25A23Q9BV35 468 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SENP6Q9GZR1 1112 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 TREX1Q9NSU2 369 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 ACTL7AQ9Y615 435 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PDE4DIPQ5VU43 2346 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 OTOFQ9HC10 1997 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 H3BMM5 538 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SOCS2O14508 198 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 RBP1P09455 135 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 MTHFD1P11586 935 aaKnown RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 GRK4P32298 578 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 CPT1AP50416 773 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SH3BP2P78314 561 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 TSPY1Q01534 308 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 GRB7Q14451 532 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 KIAA0930Q6ICG6 404 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 RETREG3Q86VR2 466 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 CBR4Q8N4T8 237 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 OR13C4Q8NGS5 318 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 NCSTNQ92542 709 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 VPS33AQ96AX1 596 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PTERQ96BW5 349 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 EXOC2Q96KP1 924 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 CYP2S1Q96SQ9 504 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SOX17Q9H6I2 414 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 UTP6Q9NYH9 597 aaKnown RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 NDUFA13Q9P0J0 144 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 TBC1D30Q9Y2I9 924 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PRG3Q9Y2Y8 225 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 LOC285556D6RIA3 1793 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PIP5K1BO14986 540 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 ALDOCP09972 364 aaKnown RBP14.63□□□□□ -0.07
SCARB2-221ENST00000640341 NCK1P16333 377 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 ATP6V1B2P21281 511 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 THPOP40225 353 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 HERC3Q15034 1050 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 UPP1Q16831 310 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 LPCAT2Q7L5N7 544 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 EGFL6Q8IUX8 553 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PELI3Q8N2H9 469 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 OR13J1Q8NGT2 312 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 SLCO4A1Q96BD0 722 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 PTPN18Q99952 460 aa14.63□□□□□ -0.07
SCARB2-221ENST00000640341 CROCCQ5TZA2 2017 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ARHGAP10A1A4S6 786 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 HSPA8P11142 646 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SLC5A2P31639 672 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 NR1H2P55055 460 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 PCBP1Q15365 356 aaKnown RBP eCLIP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 RAP1GAP2Q684P5 730 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ZNF467Q7Z7K2 595 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 CILP2Q8IUL8 1156 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 CNTN4Q8IWV2 1026 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 OFCC1Q8IZS5 231 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 RMND5BQ96G75 393 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 MAELQ96JY0 434 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ABCC13Q9NSE7 274 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 PTTG2Q9NZH5 202 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SUPT3HB4E1H0 165 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 INPP4BO15327 924 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SUPT3HO75486 399 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 HGFP14210 728 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ADSLP30566 484 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ADRA1AP35348 466 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 GALK1P51570 392 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 APLP1P51693 650 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SAMD4BQ5PRF9 694 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 CHSY3Q70JA7 882 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 TICAM1Q8IUC6 712 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SNRNP27Q8WVK2 155 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 GSTO2Q9H4Y5 243 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SARS2Q9NP81 518 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 OSER1Q9NX31 292 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 A0A1B0GTL3 188 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 HOXD8P13378 290 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 HSPA13P48723 471 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 HK2P52789 917 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 ADAM17P78536 824 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 MRPS6P82932 125 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 PFKPQ01813 784 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 TIGD7Q6NT04 549 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 RTL3Q8N8U3 475 aaKnown RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 DPF3Q92784 378 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 RPRD1AQ96P16 312 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SMIM14Q96QK8 99 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 SEPHS2Q99611 448 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 C1orf50Q9BV19 199 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 TBC1D13Q9NVG8 400 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 GALNT8Q9NY28 637 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 DMTF1Q9Y222 760 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 DNAJC15Q9Y5T4 150 aa14.62□□□□□ -0.07
SCARB2-221ENST00000640341 A0A0U1RQS6 177 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms