RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SLC10A7Q0GE19 358 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 MAPRE2Q15555 327 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 TBC1D25Q3MII6 688 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 ZNF786Q8N393 782 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 CBR4Q8N4T8 237 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 C19orf60Q96EN9 201 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 RMND5BQ96G75 393 aaPredicted RBP16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 SLC25A23Q9BV35 468 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 AKTIPQ9H8T0 292 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 PLK2Q9NYY3 685 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 ST3GAL5Q9UNP4 418 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 PFDN1O60925 122 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 SLC7A1P30825 629 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 STX1BP61266 288 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 PRKCQQ04759 706 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 TMED1Q13445 227 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 GRB7Q14451 532 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 TMEM259Q4ZIN3 620 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 LCA5Q86VQ0 697 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 OR13J1Q8NGT2 312 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 OR10T2Q8NGX3 314 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 PBXIP1Q96AQ6 731 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 PIF1Q9H611 641 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 CD300AQ9UGN4 299 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 MYRFQ9Y2G1 1151 aa16.59■□□□□ 0.25
HNRNPU-228ENST00000640306 A0A0J9YYE9 177 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 MAGEB3O15480 346 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 PRSS56P0CW18 603 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 APLP1P51693 650 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 HUNKP57058 714 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 SH3BP2P78314 561 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 ADAM17P78536 824 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 ECT2LQ008S8 904 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 SAMD4BQ5PRF9 694 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 TBCELQ5QJ74 424 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 CARM1Q86X55 608 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 SCN4BQ8IWT1 228 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 DCUN1D5Q9BTE7 237 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 OSBPL11Q9BXB4 747 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 RRN3Q9NYV6 651 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 TCRBV3S1A0A5B6 114 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 E9PAM4 449 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 NME4O00746 187 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 HAPLN1P10915 354 aaPredicted RBP16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 PCSK1P29120 753 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 CCL14Q16627 93 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 PFKFB4Q16877 469 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 CPNE9Q8IYJ1 553 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 RANBP9Q96S59 729 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 UPF3AQ9H1J1 476 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 CATSPERBQ9H7T0 1116 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 MID1IP1Q9NPA3 183 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 FLRT1Q9NZU1 646 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 TMEM181Q9P2C4 612 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 RSL24D1Q9UHA3 163 aaKnown RBP16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 TMCO1Q9UM00 188 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 HS3ST4Q9Y661 456 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 PLXNB2O15031 1838 aa16.58■□□□□ 0.24
HNRNPU-228ENST00000640306 A0A1B0GTL3 188 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 C17orf102A2RUQ5 167 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 TMX2-CTNND1H3BSU7 103 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 UBXN8O00124 270 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 STAMBPO95630 424 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 ITGB1P05556 798 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 LINC00032P0C843 101 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 DNAJB2P25686 324 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 GRIK1P39086 918 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 CASP2P42575 452 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 SERPINH1P50454 418 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 SH3BGRP55822 239 aaPredicted RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 GRB14Q14449 540 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 LARP4Q71RC2 724 aaKnown RBP eCLIP16.57■□□□□ 0.241e-8■■□□□ 12.8
HNRNPU-228ENST00000640306 ISCA2Q86U28 154 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 CILP2Q8IUL8 1156 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 TMEM86AQ8N2M4 240 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 FIBCD1Q8N539 461 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 PTGR2Q8N8N7 351 aaPredicted RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 TBATAQ96M53 351 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 SOX17Q9H6I2 414 aaPredicted RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 NMUR1Q9HB89 426 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 RGS18Q9NS28 235 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 DNAJC15Q9Y5T4 150 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 DOCK3Q8IZD9 2030 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 H3BNH8 94 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 PIP5K1BO14986 540 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 CAPNS1P04632 268 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 RBP1P09455 135 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 STT3AP46977 705 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 SLC5A3P53794 718 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 TXNL4AP83876 142 aaKnown RBP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 PCBP1Q15365 356 aaKnown RBP eCLIP16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 UNC50Q53HI1 259 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 ZNF678Q5SXM1 525 aa16.57■□□□□ 0.24
HNRNPU-228ENST00000640306 SCIMPQ6UWF3 145 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms