RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TICAM1Q8IUC6 712 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 DRAXINQ8NBI3 349 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-220ENST00000639841 CCDC110Q8TBZ0 833 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 ARRDC3Q96B67 414 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 LRIG1Q96JA1 1093 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 HSPA12BQ96MM6 686 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 PAAF1Q9BRP4 392 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 CLPBQ9H078 707 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
NECAP1-220ENST00000639841 MTIF3Q9H2K0 278 aaKnown RBP7.47□□□□□ -1.21
NECAP1-220ENST00000639841 DENND2DQ9H6A0 471 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-220ENST00000639841 P4HTMQ9NXG6 502 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 HESX1Q9UBX0 185 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 DBR1Q9UK59 544 aaKnown RBP7.47□□□□□ -1.21
NECAP1-220ENST00000639841 CDH7Q9ULB5 785 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
NECAP1-220ENST00000639841 SIPA1L1O43166 1804 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 GXYLT2A0PJZ3 443 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FAM90A8PA6NJQ4 464 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 E9PLN8 166 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 H0YCG3 227 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 AGPSO00116 658 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 SLC25A27O95847 323 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 ESR1P03372 595 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FAM90A13PP0C7W8 464 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FAM90A24PP0C7X0 464 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CYBAP13498 195 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 PRG2P13727 222 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FOSL2P15408 326 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 KIAA1024LP59773 190 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 ERVFC1P60507 584 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 STX1BP61266 288 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 PMP22Q01453 160 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CHIT1Q13231 466 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FRG1Q14331 258 aaKnown RBP7.46□□□□□ -1.21
NECAP1-220ENST00000639841 MXD4Q14582 209 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-220ENST00000639841 PTCHD3Q3KNS1 767 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FAM160B1Q5W0V3 765 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CENPPQ6IPU0 288 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 C1orf186Q6ZWK4 172 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 IQUBQ8NA54 791 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 RBM15BQ8NDT2 890 aaKnown RBP7.46□□□□□ -1.21
NECAP1-220ENST00000639841 TMIEQ8NEW7 156 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 SMARCC2Q8TAQ2 1214 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 FAM149B1Q96BN6 582 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CFAP36Q96G28 342 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 WDR92Q96MX6 357 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CDK5RAP2Q96SN8 1893 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 CDX2Q99626 313 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-220ENST00000639841 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 YIPF2Q9BWQ6 316 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 UTP6Q9NYH9 597 aaKnown RBP7.46□□□□□ -1.21
NECAP1-220ENST00000639841 STK17AQ9UEE5 414 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 SUFUQ9UMX1 484 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 OSGIN2Q9Y236 505 aa7.46□□□□□ -1.21
NECAP1-220ENST00000639841 F8W735 103 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 KIAA0391O15091 583 aaKnown RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SRGAP3O43295 1099 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SEC31AO94979 1220 aaKnown RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 ALX3O95076 343 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 PRSS23O95084 383 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 DIRAS3O95661 229 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 PDGFBP01127 241 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 UROSP10746 265 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SRCP12931 536 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 CCND3P30281 292 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 HTR7P34969 479 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 KHKP50053 298 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 TCF15Q12870 199 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SP140Q13342 867 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 ZNF569Q5MCW4 686 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 AKNAD1Q5T1N1 836 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 HEPHL1Q6MZM0 1159 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SLC39A5Q6ZMH5 540 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 INTS8Q75QN2 995 aaKnown RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 KCTD9Q7L273 389 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 GPRIN1Q7Z2K8 1008 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 FRMD5Q7Z6J6 570 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 NHLRC2Q8NBF2 726 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 MBD3L2Q8NHZ7 208 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SMARCE1Q969G3 411 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 PRR11Q96HE9 360 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 GDAP1L1Q96MZ0 367 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 TOX2Q96NM4 488 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 RBM14Q96PK6 669 aaKnown RBP7.46□□□□□ -1.22
NECAP1-220ENST00000639841 GAL3ST4Q96RP7 486 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 TCF25Q9BQ70 676 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 FERMT1Q9BQL6 677 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 PIMREGQ9BSJ6 248 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 NDC1Q9BTX1 674 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 MTMR12Q9C0I1 747 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 KCNF1Q9H3M0 494 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 GLRX2Q9NS18 164 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 SPASTQ9UBP0 616 aa7.46□□□□□ -1.22
NECAP1-220ENST00000639841 MYH1P12882 1939 aa7.45□□□□□ -1.22
NECAP1-220ENST00000639841 PER2O15055 1255 aa7.45□□□□□ -1.22
NECAP1-220ENST00000639841 CD3EAPO15446 510 aaKnown RBP7.45□□□□□ -1.22
NECAP1-220ENST00000639841 GASTP01350 101 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms