RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 DNAJC1Q96KC8 554 aaKnown RBP18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 GLT1D1Q96MS3 346 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.633e-7■■■□□ 18
CROCCP2-206ENST00000639594 VCX3BQ9H321 246 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 TRIM17Q9Y577 477 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 ACTL7AQ9Y615 435 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 UBFD1O14562 309 aaKnown RBP18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 PIRTP0C851 137 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 ZCCHC18P0CG32 403 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 TSPAN8P19075 237 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 KCNQ1P51787 676 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 YBEYP58557 167 aaPredicted RBP18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 ACVR1Q04771 509 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 FLOT2Q14254 428 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 SEMA3AQ14563 771 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 PPP1R3AQ16821 1122 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 RNF220Q5VTB9 566 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 FAM45BPQ6NSW5 357 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 SLC22A9Q8IVM8 553 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 OR13C4Q8NGS5 318 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 FAM45AQ8TCE6 357 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 GIPC2Q8TF65 315 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 TMA16Q96EY4 203 aaKnown RBP18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 FAR2Q96K12 515 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 PSMD13Q9UNM6 376 aa18.96■□□□□ 0.63
CROCCP2-206ENST00000639594 RNASEH1O60930 286 aaKnown RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 HSPA1AP0DMV8 641 aaKnown RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 HSPA1BP0DMV9 641 aaKnown RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 IMPDH1P20839 514 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 FGFR3P22607 806 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 MAPKAPK2P49137 400 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 TIAL1Q01085 375 aaKnown RBP eCLIP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 RING1Q06587 406 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 ZNF235Q14590 738 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 RFTN1Q14699 578 aaPredicted RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 LGI2Q8N0V4 545 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 SLAIN1Q8ND83 568 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 PTERQ96BW5 349 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 FEM1CQ96JP0 617 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 TUBGCP5Q96RT8 1024 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 PDFQ9HBH1 243 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 HMX1Q9NP08 348 aaPredicted RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 MARCH5Q9NX47 278 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 TET1Q8NFU7 2136 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 A0A0D9SEW6 157 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 CCDC162PA2VCL2 907 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 CD3EAPO15446 510 aaKnown RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 GLP2RO95838 553 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 MYCP01106 439 aaPredicted RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 FDXRP22570 491 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 MRPS22P82650 360 aaKnown RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 DUSP4Q13115 394 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 GPR17Q13304 367 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 APLFQ8IW19 511 aaPredicted RBP18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 AFAP1L2Q8N4X5 818 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 OR52K2Q8NGK3 314 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 SPATA17Q96L03 361 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 SAGE1Q9NXZ1 904 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 TRAF6Q9Y4K3 522 aa18.95■□□□□ 0.62
CROCCP2-206ENST00000639594 CCDC189A1A4V9 331 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 TLR5O60602 858 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 FGF1P05230 155 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 UQCRBP14927 111 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 HLA-DPA1P20036 260 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 ME2P23368 584 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 GALNT1Q10472 559 aaPredicted RBP18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 ZNF678Q5SXM1 525 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 CLEC6AQ6EIG7 209 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 ABI1Q8IZP0 508 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 PQLC1Q8N2U9 271 aa18.94■□□□□ 0.62
CROCCP2-206ENST00000639594 NT5C1B-RDH14C9J2C7 533 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 UBDO15205 165 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 SUPT7LO94864 414 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 SLC6A4P31645 630 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 SLC26A3P40879 764 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 ALDH1A3P47895 512 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 SLC11A1P49279 550 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 ATXN3P54252 364 aaPredicted RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 XIAPP98170 497 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 UNC50Q53HI1 259 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 RTP2Q5QGT7 225 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 OGFRL1Q5TC84 451 aaPredicted RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 BHLHE22Q8NFJ8 381 aaPredicted RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 EXT2Q93063 718 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 L3HYPDHQ96EM0 354 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 TRPC7Q9HCX4 862 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 POLR3BQ9NW08 1133 aaPredicted RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 ANKRD12Q6UB98 2062 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 RPP40O75818 363 aaKnown RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 ALDH2P05091 517 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 ZDHHC11BP0C7U3 371 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 CD1DP15813 335 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 INHBCP55103 352 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 GRAMD1BQ3KR37 738 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 RYBPQ8N488 228 aaPredicted RBP18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 GPR150Q8NGU9 434 aa18.93■□□□□ 0.62
CROCCP2-206ENST00000639594 BRSK1Q8TDC3 778 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms