RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 PSMA8Q8TAA3 256 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 MAP6Q96JE9 813 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ELMO2Q96JJ3 720 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 RNF157Q96PX1 679 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 KIFC3Q9BVG8 833 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 RHOBTB2Q9BYZ6 727 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ING2Q9H160 280 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 PIM2Q9P1W9 311 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ADGRA2Q96PE1 1338 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 MAGEB16A2A368 324 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 BBIP1A8MTZ0 92 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF99A8MXY4 864 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SDHDO14521 159 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 MRASO14807 208 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 HNRNPDLO14979 420 aaKnown RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 NDUFB10O96000 172 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SNRPB2P08579 225 aaKnown RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 MIPP30301 263 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 PRIM2P49643 509 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ATP4BP51164 291 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 RACK1P63244 317 aaKnown RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 PCSK7Q16549 785 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 GEN1Q17RS7 908 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 TYSND1Q2T9J0 566 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ARL13AQ5H913 290 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 UBE2Q1Q7Z7E8 422 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 UBQLNLQ8IYU4 475 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 HMGCLL1Q8TB92 370 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SLC22A17Q8WUG5 538 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 PROX1Q92786 737 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 MUS81Q96NY9 551 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF300Q96RE9 604 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 TWNKQ96RR1 684 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 HOPXQ9BPY8 73 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-221ENST00000638141 CALN1Q9BXU9 219 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 FBXO28Q9NVF7 368 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 DTLQ9NZJ0 730 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SLCO3A1Q9UIG8 710 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ZDHHC2Q9UIJ5 367 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 GGA1Q9UJY5 639 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 USP18Q9UMW8 372 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 ANKRD6Q9Y2G4 727 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SNX5Q9Y5X3 404 aa12.05□□□□□ -0.48
CAPN3-221ENST00000638141 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CNTNAP1P78357 1384 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 UNCXA6NJT0 531 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 MED7O43513 233 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 NRP2O60462 931 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 HPRP00739 348 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 GSTM1P09488 218 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 TFE3P19532 575 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 SPRP35270 261 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 EPS8Q12929 822 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PLCL1Q15111 1095 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 DPY19L1Q2PZI1 675 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 C5orf22Q49AR2 442 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 KCNT1Q5JUK3 1230 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CATSPEREQ5SY80 951 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 GPAT2Q6NUI2 795 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PNCKQ6P2M8 343 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CCBE1Q6UXH8 406 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 HORMAD1Q86X24 394 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CCDC185Q8N715 623 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 TTLL6Q8N841 843 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 GABPB2Q8TAK5 448 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 YIPF6Q96EC8 236 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 MMP27Q9H306 513 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 NMRAL1Q9HBL8 299 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 ABCB10Q9NRK6 738 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 ACOXLQ9NUZ1 547 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 OSGIN1Q9UJX0 560 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PCM1Q15154 2024 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PDZK1P1A8MUH7 402 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 hCG_2039718K7EN88 272 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 APOL1O14791 398 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 B4GAT1O43505 415 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 EGFRP00533 1210 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 GFAPP14136 432 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 SHMT2P34897 504 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 JAK3P52333 1124 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 SLC7A2P52569 658 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 NDST1P52848 882 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 LIMK2P53671 638 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 BNC1Q01954 994 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 ZNF45Q02386 682 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 GRM1Q13255 1194 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 FASTKQ14296 549 aaKnown RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CARTPTQ16568 116 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 TTC23Q5W5X9 447 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 CCDC103Q8IW40 242 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
CAPN3-221ENST00000638141 C8orf59Q8N0T1 100 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-221ENST00000638141 PLD6Q8N2A8 252 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms