RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ATP13A3Q9H7F0 1226 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 GPATCH2LQ9NWQ4 482 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
CACNA1A-250ENST00000637809 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 AGRPO00253 132 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 B4GAT1O43505 415 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 PALMO75781 387 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 FUCA1P04066 466 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 ELFN1P0C7U0 828 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 FAM87AP0C7U9 286 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 KELP23276 732 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 SERPINA4P29622 427 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 C16orf72Q14CZ0 275 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 SYCP1Q15431 976 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 PNCKQ6P2M8 343 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 DPPA4Q7L190 304 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 ZNF438Q7Z4V0 828 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 NRROSQ86YC3 692 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 ARFGAP1Q8N6T3 406 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 NPWQ8N729 165 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 GPBAR1Q8TDU6 330 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 HTR3CQ8WXA8 447 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 CMKLR1Q99788 373 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 TRIM4Q9C037 500 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 NUP62CLQ9H1M0 184 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 DPEP2Q9H4A9 486 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 WDR26Q9H7D7 661 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 CYP4F12Q9HCS2 524 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 SPATS2LQ9NUQ6 558 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 DONSONQ9NYP3 566 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 NAV2Q8IVL1 2488 aa12.17□□□□□ -0.46
CACNA1A-250ENST00000637809 PRSS38A1L453 326 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGAP42A6NI28 874 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 A8MX80 341 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 FGF1P05230 155 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 CCL4P13236 92 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 ARSDP51689 593 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 MAZP56270 477 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 CYP4F2P78329 520 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 NFKB2Q00653 900 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 BCL2L1Q07817 233 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 NSUN2Q08J23 767 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 NR1D2Q14995 579 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 TBR1Q16650 682 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 MANEAQ5SRI9 462 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 ZNF574Q6ZN55 896 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 CYP4V2Q6ZWL3 525 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 COQ10AQ96MF6 247 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 PEBP4Q96S96 227 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 SEMA3CQ99985 751 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 SYT11Q9BT88 431 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 FAM117AQ9C073 453 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 B3GNT4Q9C0J1 378 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 RDH14Q9HBH5 336 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 FANCLQ9NW38 375 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 SEPT10Q9P0V9 454 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 AP4E1Q9UPM8 1137 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 HEMK1Q9Y5R4 338 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 FLNCQ14315 2725 aa12.16□□□□□ -0.46
CACNA1A-250ENST00000637809 ANKRD62A6NC57 917 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 LGALS16A8MUM7 142 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 SUV39H1O43463 412 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CPNE6O95741 557 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CEACAM5P06731 702 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CCNB1P14635 433 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 ERCC2P18074 760 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CD82P27701 267 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 COPB1P53618 953 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 MAPK10P53779 464 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 OR1D5P58170 312 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 AP1S1P61966 158 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 POLR2LP62875 67 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 MAMLD1Q13495 774 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 RFTN1Q14699 578 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CLCA4Q14CN2 919 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 MAP9Q49MG5 647 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 ACAD10Q6JQN1 1059 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 DCUN1D2Q6PH85 259 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 TP53INP2Q8IXH6 220 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 CBARPQ8N350 705 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 KIAA1524Q8TCG1 905 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 PSKH2Q96QS6 385 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 NUDT22Q9BRQ3 303 aa12.15□□□□□ -0.46
CACNA1A-250ENST00000637809 ARHGAP9Q9BRR9 750 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms