RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LATO43561 262 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 MMP20O60882 483 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 RHOBTB1O94844 696 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 HEXIM1O94992 359 aaKnown RBP16.04■□□□□ 0.16
CLN6-216ENST00000636876 FSBPO95073 299 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 IGHV4-34P06331 123 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 PIRTP0C851 137 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 TPSB2P20231 275 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 LHCGRP22888 699 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 ADCY8P40145 1251 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 LIG3P49916 1009 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 RPS21P63220 83 aaKnown RBP16.04■□□□□ 0.16
CLN6-216ENST00000636876 CDK16Q00536 496 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 KCNJ11Q14654 390 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 TPSAB1Q15661 275 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 CNGA3Q16281 694 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 ZNF284Q2VY69 593 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 SEL1L3Q68CR1 1132 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 CRTC1Q6UUV9 634 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 LIPIQ6XZB0 460 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 LINC00523Q86TU6 105 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 TSPAN33Q86UF1 283 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 SLC41A1Q8IVJ1 513 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 DEFB119Q8N690 84 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 FOXJ1Q92949 421 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 HSPA12BQ96MM6 686 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 SRPK1Q96SB4 655 aaKnown RBP16.04■□□□□ 0.16
CLN6-216ENST00000636876 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 MAGEE1Q9HCI5 957 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.04■□□□□ 0.16
CLN6-216ENST00000636876 GPR179Q6PRD1 2367 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 CEP192Q8TEP8 1941 aa16.04■□□□□ 0.16
CLN6-216ENST00000636876 IGLON5A6NGN9 336 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 ELFN1P0C7U0 828 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 C6P13671 934 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 ZNF30P17039 623 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 IVDP26440 423 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 MAT2AP31153 395 aaKnown RBP16.03■□□□□ 0.16
CLN6-216ENST00000636876 TERF1P54274 439 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 MRPS25P82663 173 aaKnown RBP16.03■□□□□ 0.16
CLN6-216ENST00000636876 ARHGEF7Q14155 803 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 CDKN3Q16667 212 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 PPP1R21Q6ZMI0 780 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 PRR23BQ6ZRT6 265 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 MMGT1Q8N4V1 131 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 CPT1BQ92523 772 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 ATOH1Q92858 354 aaPredicted RBP16.03■□□□□ 0.16
CLN6-216ENST00000636876 BIRC7Q96CA5 298 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 CARD6Q9BX69 1037 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 C1QTNF2Q9BXJ5 285 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 HACD3Q9P035 362 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 SPO11Q9Y5K1 396 aa16.03■□□□□ 0.16
CLN6-216ENST00000636876 A0A0U1RQS6 177 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 C1orf232A0A0U1RR37 186 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 MEI4A8MW99 385 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 PSMD11O00231 422 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 DNALI1O14645 258 aaPredicted RBP16.02■□□□□ 0.16
CLN6-216ENST00000636876 GFRA3O60609 400 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 NUDT1P36639 197 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 GRIA1P42261 906 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 PTGER3P43115 390 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 DHPSP49366 369 aaPredicted RBP16.02■□□□□ 0.16
CLN6-216ENST00000636876 STC1P52823 247 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 FGL2Q14314 439 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 RNASEH2BQ5TBB1 312 aaKnown RBP16.02■□□□□ 0.16
CLN6-216ENST00000636876 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 LRRC66Q68CR7 880 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 LYSMD3Q7Z3D4 306 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 PPIL6Q8IXY8 311 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 CBARPQ8N350 705 aaPredicted RBP16.02■□□□□ 0.16
CLN6-216ENST00000636876 NOA1Q8NC60 698 aaKnown RBP16.02■□□□□ 0.16
CLN6-216ENST00000636876 ASB12Q8WXK4 309 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 SNX19Q92543 992 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 KLK6Q92876 244 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 TRABDQ9H4I3 376 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 CASS4Q9NQ75 786 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 COQ6Q9Y2Z9 468 aa16.02■□□□□ 0.16
CLN6-216ENST00000636876 DOCK9Q9BZ29 2069 aa16.02■□□□□ 0.15
CLN6-216ENST00000636876 LRRK1Q38SD2 2015 aa16.02■□□□□ 0.15
CLN6-216ENST00000636876 DMDP11532 3685 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 EFCAB8A8MWE9 144 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 LZTS3O60299 673 aaPredicted RBP16.01■□□□□ 0.15
CLN6-216ENST00000636876 TM7SF2O76062 418 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 TMEM63AO94886 807 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 CLDN7O95471 211 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 GM2AP17900 193 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 CDH17Q12864 832 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 SGCGQ13326 291 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 MSLNQ13421 630 aaPredicted RBP16.01■□□□□ 0.15
CLN6-216ENST00000636876 SETMARQ53H47 684 aaPredicted RBP16.01■□□□□ 0.15
CLN6-216ENST00000636876 WDR45BQ5MNZ6 344 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 IZUMO3Q5VZ72 239 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 LYSMD4Q5XG99 296 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 C8orf74Q6P047 294 aa16.01■□□□□ 0.15
CLN6-216ENST00000636876 HSD11B1LQ7Z5J1 315 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms