RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 DPP6P42658 865 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 BASP1P80723 227 aaKnown RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 DSC2Q02487 901 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CDK18Q07002 472 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ITKQ08881 620 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 C2orf54Q08AI8 447 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CDH17Q12864 832 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SNX1Q13596 522 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CUL1Q13616 776 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PRRT3Q5FWE3 981 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SPDYCQ5MJ68 293 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ZDHHC20Q5W0Z9 365 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ERAP2Q6P179 960 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 KDELC1Q6UW63 502 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SLC36A4Q6YBV0 504 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 Q6ZS52 159 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 NLRP9Q7RTR0 991 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 NLRP8Q86W28 1048 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CCNJLQ8IV13 435 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 KLHL7Q8IXQ5 586 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 MCUQ8NE86 351 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CCDC110Q8TBZ0 833 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 DTX3LQ8TDB6 740 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ASB12Q8WXK4 309 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PBXIP1Q96AQ6 731 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SIPA1Q96FS4 1042 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SPACA7Q96KW9 195 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 MRGPRX1Q96LB2 322 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 TRIB3Q96RU7 358 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 FAM129BQ96TA1 746 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ACOX2Q99424 681 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 KRT12Q99456 494 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 FAM118BQ9BPY3 351 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ERP44Q9BS26 406 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 FAM117AQ9C073 453 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ZCCHC2Q9C0B9 1178 aaKnown RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 TNKS2Q9H2K2 1166 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PABPC3Q9H361 631 aaKnown RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SGK2Q9HBY8 427 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 NOD2Q9HC29 1040 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ZDHHC4Q9NPG8 344 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 FAM114A2Q9NRY5 505 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 SMARCAL1Q9NZC9 954 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 NFKBIL1Q9UBC1 381 aaPredicted RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 EVLQ9UI08 416 aaPredicted RBP6.76□□□□□ -1.33
UPF3B-205ENST00000636792 RIMKLBQ9ULI2 386 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 PHTF1Q9UMS5 762 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 TTLL3Q9Y4R7 772 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
UPF3B-205ENST00000636792 ZNF318Q5VUA4 2279 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 SPAG17Q6Q759 2223 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 A0A0J9YYE9 177 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 KPNA3O00505 521 aaPredicted RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TOR1BO14657 336 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TTI1O43156 1089 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 RAD51CO43502 376 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TSPAN6O43657 245 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 PLRG1O43660 514 aaKnown RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 HEXIM1O94992 359 aaKnown RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 IL1BP01584 269 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TRBC1P01850 177 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 UGT2B4P06133 528 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 PYGLP06737 847 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 CTSLP07711 333 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 APRTP07741 180 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 CYP2A6P11509 494 aaPredicted RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 HLA-EP13747 358 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 ADRB3P13945 408 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 GABRG2P18507 467 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 XPAP23025 273 aaPredicted RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TNFRSF8P28908 595 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 SLC8A1P32418 973 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 ADRA1AP35348 466 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 DRD3P35462 400 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 ADCY8P40145 1251 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 CD86P42081 329 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 RGRP47804 291 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 KCNJ1P48048 391 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 EPHB1P54762 984 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 WNT3AP56704 352 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 MAXP61244 160 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 RPS14P62263 151 aaKnown RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 NIPAL4Q0D2K0 466 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 ILF2Q12905 390 aaKnown RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 TRAF2Q12933 501 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 GPS1Q13098 491 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 MTAPQ13126 283 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 KCNJ11Q14654 390 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 SLC1A5Q15758 541 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 UGP2Q16851 508 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 MAP7D1Q3KQU3 841 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 ATXN7L2Q5T6C5 722 aaPredicted RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 RNASEH2BQ5TBB1 312 aaKnown RBP6.75□□□□□ -1.33
UPF3B-205ENST00000636792 EMC10Q5UCC4 262 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 DUPD1Q68J44 220 aa6.75□□□□□ -1.33
UPF3B-205ENST00000636792 KIAA1161Q6NSJ0 714 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms