RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 CSRP3P50461 194 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 CCDC173Q0VFZ6 552 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 ZBTB17Q13105 803 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 NOMO1Q15155 1222 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 TMEM259Q4ZIN3 620 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 SEL1L2Q5TEA6 688 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 PRPF39Q86UA1 669 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 CAMK1DQ8IU85 385 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 TFB1MQ8WVM0 346 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 HAUS1Q96CS2 278 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 SEMA3CQ99985 751 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 HERPUD2Q9BSE4 406 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 HEMGNQ9BXL5 484 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 NRSN2Q9GZP1 204 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 RBM22Q9NW64 420 aaKnown RBP eCLIP16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 TTLL3Q9Y4R7 772 aa16.3■□□□□ 0.2
CACNA1A-229ENST00000636670 A0A1W2PQU0 124 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 KCNK1O00180 336 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 SLC28A2O43868 658 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 ZNF189O75820 626 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 TJP3O95049 919 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 PCDH8O95206 1070 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 CPP00450 1065 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 CA4P22748 312 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 MMP12P39900 470 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 AFF3P51826 1226 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 RPS21P63220 83 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 RACK1P63244 317 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 TRAF2Q12933 501 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 XRCC4Q13426 336 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 RTP5Q14D33 572 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 UGP2Q16851 508 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 MEI1Q5TIA1 1274 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 ZSWIM9Q86XI8 627 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 LRRN4Q8WUT4 740 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 NSMCE3Q96MG7 304 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 SEMA4CQ9C0C4 833 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 NOD2Q9HC29 1040 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 TM9SF3Q9HD45 589 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 SAE1Q9UBE0 346 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 ZFR2Q9UPR6 939 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 ITM2BQ9Y287 266 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 LRP4O75096 1905 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 MGAQ8IWI9 3026 aa16.29■□□□□ 0.2
CACNA1A-229ENST00000636670 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 NEMP1O14524 444 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 TIMP2P16035 220 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 NFKBIAP25963 317 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 GRK6P43250 576 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 POLR2LP62875 67 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 OTUD4Q01804 1114 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 BNC1Q01954 994 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 DSC2Q02487 901 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 ZNF211Q13398 564 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 TEAD4Q15561 434 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 SLC14A2Q15849 920 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 ZNF284Q2VY69 593 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 SLC45A4Q5BKX6 768 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 AADACL2Q6P093 401 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 ERAP2Q6P179 960 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 CDKL3Q8IVW4 592 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 PAF1Q8N7H5 531 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 TTC13Q8NBP0 860 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 SLC6A18Q96N87 628 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 CARD9Q9H257 536 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 EBF2Q9HAK2 575 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 GGT7Q9UJ14 662 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 SLCO1B1Q9Y6L6 691 aa16.28■□□□□ 0.2
CACNA1A-229ENST00000636670 CABIN1Q9Y6J0 2220 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 JCHAINP01591 159 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 CDK4P11802 303 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 HNRNPA2B1P22626 353 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 MAT2AP31153 395 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 ITKQ08881 620 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 RPS6KA1Q15418 735 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 TMEM52BQ4KMG9 183 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 LRRC73Q5JTD7 316 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 SEL1L3Q68CR1 1132 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 ZC3H18Q86VM9 953 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 SPACA3Q8IXA5 215 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 CNTD1Q8N815 330 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 DENND6BQ8NEG7 585 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 ARRDC2Q8TBH0 407 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 CXorf40AQ8TE69 158 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 ASB12Q8WXK4 309 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 FEM1CQ96JP0 617 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 SERAC1Q96JX3 654 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 VAT1Q99536 393 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 FERMT1Q9BQL6 677 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 TDRD1Q9BXT4 1180 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.2
CACNA1A-229ENST00000636670 SEPT10Q9P0V9 454 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms