RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 LRRD1A4D1F6 860 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 CFAP69A5D8W1 941 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 SCAMP1O15126 338 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 HTRA2O43464 458 aaPredicted RBP18.45■□□□□ 0.54
CLN6-214ENST00000636314 NEBLO76041 1014 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 GIMD1P0DJR0 217 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 KDELR1P24390 212 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 NFKBIAP25963 317 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 ITKQ08881 620 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 AGERQ15109 404 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
CLN6-214ENST00000636314 PHACTR4Q8IZ21 702 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 RBFAQ8N0V3 343 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 TEX26Q8N6G2 289 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 LMX1AQ8TE12 382 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 SPOCK2Q92563 424 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 RAPGEF5Q92565 580 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
CLN6-214ENST00000636314 POLR1EQ9GZS1 481 aaKnown RBP18.45■□□□□ 0.54
CLN6-214ENST00000636314 EVA1BQ9NVM1 165 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 HAUS2Q9NVX0 235 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 B4GALT6Q9UBX8 382 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 KLF15Q9UIH9 416 aa18.45■□□□□ 0.54
CLN6-214ENST00000636314 K7ESM1 405 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 AQP9O43315 295 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 RECQL5O94762 991 aaPredicted RBP18.44■□□□□ 0.54
CLN6-214ENST00000636314 MX2P20592 715 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 HTR1BP28222 390 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 PEX5P50542 639 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 CFHR1Q03591 330 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 GBE1Q04446 702 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 TRAF2Q12933 501 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 MTM1Q13496 603 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 INPP5AQ14642 412 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 TAF1BQ53T94 588 aaPredicted RBP18.44■□□□□ 0.54
CLN6-214ENST00000636314 LIPIQ6XZB0 460 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 PQLC3Q8N755 202 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 ZNF248Q8NDW4 579 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.44■□□□□ 0.54
CLN6-214ENST00000636314 SEMA3CQ99985 751 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 SLC13A1Q9BZW2 595 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 SPASTQ9UBP0 616 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 TTLL3Q9Y4R7 772 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 CSNK1G3Q9Y6M4 447 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 LRP4O75096 1905 aa18.44■□□□□ 0.54
CLN6-214ENST00000636314 A8MX80 341 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 MATN3O15232 486 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 KRT1P04264 644 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 CCNCP24863 283 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 PCBP4P57723 403 aaKnown RBP18.43■□□□□ 0.54
CLN6-214ENST00000636314 PPARDQ03181 441 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 NFATC4Q14934 902 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 ACOX1Q15067 660 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 PRRT3Q5FWE3 981 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 ARMC12Q5T9G4 340 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 FAXCQ5TGI0 409 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 BROXQ5VW32 411 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 ZCCHC8Q6NZY4 707 aaKnown RBP18.43■□□□□ 0.54
CLN6-214ENST00000636314 MAML1Q92585 1016 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 APOLD1Q96LR9 279 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 TBATAQ96M53 351 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 TSGA13Q96PP4 275 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 RNF157Q96PX1 679 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 APOOQ9BUR5 198 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 LRRC61Q9BV99 259 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 TCEAL2Q9H3H9 227 aaPredicted RBP18.43■□□□□ 0.54
CLN6-214ENST00000636314 PHTF1Q9UMS5 762 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 OR1A2Q9Y585 309 aa18.43■□□□□ 0.54
CLN6-214ENST00000636314 ZNF487B1APH4 448 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 SPOPO43791 374 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 PGLSO95336 258 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 MPOP05164 745 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 CYP2A6P11509 494 aaPredicted RBP18.42■□□□□ 0.54
CLN6-214ENST00000636314 CKMT1AP12532 417 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 TNNT1P13805 278 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 VIPR1P32241 457 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 SLC1A1P43005 524 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 BLKP51451 505 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 GABREP78334 506 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 CNGA3Q16281 694 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 DEFB133Q30KQ1 61 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 LRRC38Q5VT99 294 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 USP45Q70EL2 814 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 VSIG1Q86XK7 387 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 RHOT1Q8IXI2 618 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 FAM181AQ8N9Y4 354 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 CCNYQ8ND76 341 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 ATL2Q8NHH9 583 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 FATE1Q969F0 183 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 HDAC11Q96DB2 347 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 ZNF578Q96N58 590 aaPredicted RBP18.42■□□□□ 0.54
CLN6-214ENST00000636314 DEPDC7Q96QD5 511 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 IL12RB2Q99665 862 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 RBSNQ9H1K0 784 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 USP29Q9HBJ7 922 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 RBM22Q9NW64 420 aaKnown RBP eCLIP18.42■□□□□ 0.54
CLN6-214ENST00000636314 DTLQ9NZJ0 730 aa18.42■□□□□ 0.54
CLN6-214ENST00000636314 AMACRQ9UHK6 382 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms