RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TP53INP2Q8IXH6 220 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 OR56A4Q8NGH8 313 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 NUS1Q96E22 293 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 CLPBQ9H078 707 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 POLR1BQ9H9Y6 1135 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 ETNK2Q9NVF9 386 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 LCMT1Q9UIC8 334 aa17.99■□□□□ 0.47
PNKP-225ENST00000636214 PNMA8BQ9ULN7 279 aaPredicted RBP17.99■□□□□ 0.47
PNKP-225ENST00000636214 GOLGA6CA6NDK9 693 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 GOLGA6BA6NDN3 693 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
PNKP-225ENST00000636214 CBFA2T2O43439 604 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 GOLGA6DP0CG33 693 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 RBMS1P29558 406 aaKnown RBP17.98■□□□□ 0.47
PNKP-225ENST00000636214 CASP14P31944 242 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 VIPR1P32241 457 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 SLC25A11Q02978 314 aaKnown RBP17.98■□□□□ 0.47
PNKP-225ENST00000636214 ITKQ08881 620 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 CCDC173Q0VFZ6 552 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 TRIM14Q14142 442 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 ARHGEF7Q14155 803 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 ISXQ2M1V0 245 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 C3orf38Q5JPI3 329 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 MAP7D3Q8IWC1 876 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 KCTD6Q8NC69 237 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 OR6C4Q8NGE1 309 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 CTNNBL1Q8WYA6 563 aaPredicted RBP17.98■□□□□ 0.47
PNKP-225ENST00000636214 CCDC3Q9BQI4 270 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 MGME1Q9BQP7 344 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 THSD1Q9NS62 852 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 ZNHIT6Q9NWK9 470 aaKnown RBP17.98■□□□□ 0.47
PNKP-225ENST00000636214 GOLGA6AQ9NYA3 693 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 PCDHGC4Q9Y5F7 938 aa17.98■□□□□ 0.47
PNKP-225ENST00000636214 TTC24A2A3L6 582 aaPredicted RBP17.97■□□□□ 0.47
PNKP-225ENST00000636214 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
PNKP-225ENST00000636214 MAFKO60675 156 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 GYPCP04921 128 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 CELA2BP08218 269 aaPredicted RBP17.97■□□□□ 0.47
PNKP-225ENST00000636214 LSSP48449 732 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 MAXP61244 160 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 PERM1Q5SV97 790 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 ARMC12Q5T9G4 340 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 BROXQ5VW32 411 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 TXNRD3NBQ6F5E7 133 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 TIGD7Q6NT04 549 aaPredicted RBP17.97■□□□□ 0.47
PNKP-225ENST00000636214 USP45Q70EL2 814 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 TAF8Q7Z7C8 310 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 KYQ8NBH2 561 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 PLA2G15Q8NCC3 412 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 ZNF248Q8NDW4 579 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 NOD2Q9HC29 1040 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 NT5MQ9NPB1 228 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 PHPT1Q9NRX4 125 aaPredicted RBP17.97■□□□□ 0.47
PNKP-225ENST00000636214 UVRAGQ9P2Y5 699 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 PHTF1Q9UMS5 762 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 DGKBQ9Y6T7 804 aa17.97■□□□□ 0.47
PNKP-225ENST00000636214 IGSF10Q6WRI0 2623 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 TNFRSF10CO14798 259 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 H2AFZP0C0S5 128 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 CA4P22748 312 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 ITPKBP27987 946 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 EPHB1P54762 984 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 SKOR2Q2VWA4 1001 aaPredicted RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 ZSCAN23Q3MJ62 389 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 PNCKQ6P2M8 343 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 FOXR1Q6PIV2 292 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 H2AFVQ71UI9 128 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 FUBP1Q96AE4 644 aaKnown RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 ATXN7L3BQ96GX2 97 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 ZNF830Q96NB3 372 aaPredicted RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 RBM15Q96T37 977 aaKnown RBP eCLIP17.96■□□□□ 0.477e-9■■■□□ 16.1
PNKP-225ENST00000636214 XPO4Q9C0E2 1151 aaKnown RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 POLR1EQ9GZS1 481 aaKnown RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 SATB2Q9UPW6 733 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 TTLL3Q9Y4R7 772 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 FASNP49327 2511 aaKnown RBP17.96■□□□□ 0.47
PNKP-225ENST00000636214 LRP4O75096 1905 aa17.96■□□□□ 0.47
PNKP-225ENST00000636214 UNC13CQ8NB66 2214 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 KRT7P08729 469 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 HOXC4P09017 264 aaPredicted RBP17.95■□□□□ 0.46
PNKP-225ENST00000636214 CR2P20023 1033 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 ERVPABLB-1P60509 514 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 MMRN1Q13201 1228 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 PDK2Q15119 407 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 CNGA3Q16281 694 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 PGBD5Q8N414 524 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 FAM46DQ8NEK8 389 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 OR1E3Q8WZA6 343 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 SPOCK2Q92563 424 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 CCDC74AQ96AQ1 378 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 NAF1Q96HR8 494 aaKnown RBP17.95■□□□□ 0.46
PNKP-225ENST00000636214 GFM1Q96RP9 751 aaKnown RBP17.95■□□□□ 0.46
PNKP-225ENST00000636214 SUDS3Q9H7L9 328 aaPredicted RBP17.95■□□□□ 0.46
PNKP-225ENST00000636214 CYP4F12Q9HCS2 524 aa17.95■□□□□ 0.46
PNKP-225ENST00000636214 TMEM202A6NGA9 273 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 TMX2-CTNND1H3BSU7 103 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 PSMD11O00231 422 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms