RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RABIFP47224 123 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PIP4K2AP48426 406 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ZNF81P51508 661 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CCNHP51946 323 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ATXN3P54252 364 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PLTPP55058 493 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 VCPP55072 806 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 POLE2P56282 527 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ACTR2P61160 394 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TRA2BP62995 288 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TUBA1BP68363 451 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 IRX1P78414 480 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 MRPS5P82675 430 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 FOXI1Q12951 378 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 LAMB3Q13751 1172 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 DPYSQ14117 519 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 GALNT3Q14435 633 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PDIA5Q14554 519 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 EFTUD2Q15029 972 aaKnown RBP eCLIP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 RCN1Q15293 331 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TBCEQ15813 527 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TBCCQ15814 346 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CYP1B1Q16678 543 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 HADHQ16836 314 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CCDC57Q2TAC2 916 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 XKR3Q5GH77 459 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 STXBP5Q5T5C0 1151 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ERMARDQ5T6L9 678 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 FAM90A2PQ658T7 463 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CAPRIN2Q6IMN6 1127 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CAVIN1Q6NZI2 390 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PAPD4Q6PIY7 484 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CLEC2AQ6UVW9 174 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 Q6ZNX1 250 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 LINC00696Q6ZRV3 163 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TUBA1AQ71U36 451 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 H1FNTQ75WM6 255 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TAOK1Q7L7X3 1001 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 BHLHA9Q7RTU4 235 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CACNA2D4Q7Z3S7 1137 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CPLX4Q7Z7G2 160 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 MRPL10Q7Z7H8 261 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ADGRA1Q86SQ6 560 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 HOOK3Q86VS8 718 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 GATAD2AQ86YP4 633 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 RFX6Q8HWS3 928 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 UNC5CLQ8IV45 518 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 RASGRP3Q8IV61 690 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 WDR63Q8IWG1 891 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CNTN4Q8IWV2 1026 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 FAM9CQ8IZT9 166 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 XXYLT1Q8NBI6 393 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 FAM98AQ8NCA5 519 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ERMNQ8TAM6 284 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 HASPINQ8TF76 798 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ABHD5Q8WTS1 349 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 AFG1LQ8WV93 481 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 METTL21AQ8WXB1 218 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 SMG7Q92540 1137 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 CUL5Q93034 780 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 RAB7BQ96AH8 199 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 SPACA9Q96E40 222 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ALG14Q96F25 216 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 SIPA1Q96FS4 1042 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 RAB3IPQ96QF0 476 aaPredicted RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PRAM1Q96QH2 718 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 AIFM2Q9BRQ8 373 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 STRA6Q9BX79 667 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 NSRP1Q9H0G5 558 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PABPC3Q9H361 631 aaKnown RBP3.03□□□□□ -1.92
PSPC1-208ENST00000635562 MUC13Q9H3R2 512 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 ABHD16BQ9H3Z7 469 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 GORASP2Q9H8Y8 452 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 BRF2Q9HAW0 419 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TMEM165Q9HC07 324 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 GLOD4Q9HC38 313 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 IL1RAPL2Q9NP60 686 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 SLC35C2Q9NQQ7 365 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PRDM8Q9NQV8 689 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 TAB2Q9NYJ8 693 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 EHD3Q9NZN3 535 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 VPS18Q9P253 973 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PI4KBQ9UBF8 816 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 HDAC6Q9UBN7 1215 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 BAG5Q9UL15 447 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 USP22Q9UPT9 525 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PCDHGA5Q9Y5G8 931 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 PCDHGA1Q9Y5H4 931 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 LYVE1Q9Y5Y7 322 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 GMEB1Q9Y692 573 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 SCRIBQ14160 1630 aa3.03□□□□□ -1.92
PSPC1-208ENST00000635562 IGSF1Q8N6C5 1336 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 TRAV6A0A075B6T7 132 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 hCG_1809904A0A1W2PP81 198 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 A0A1W2PPE2 198 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 A0A1W2PR64 198 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 A0A1W2PRV1 198 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 RSPH10B2B2RC85 870 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 H0YIN7 160 aa3.02□□□□□ -1.93
PSPC1-208ENST00000635562 J3KTA2 159 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms