RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 FEM1CQ96JP0 617 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 ASB2Q96Q27 587 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 RGS18Q9NS28 235 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 UXTQ9UBK9 157 aaPredicted RBP8.1□□□□□ -1.11
GPC3-204ENST00000631057 SUCOQ9UBS9 1254 aaKnown RBP8.1□□□□□ -1.11
GPC3-204ENST00000631057 RIMS3Q9UJD0 308 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 RAB26Q9ULW5 256 aa8.1□□□□□ -1.11
GPC3-204ENST00000631057 PRSS51A0A1B0GVH4 220 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 LOC285095A0A1B0GVY8 99 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 CAPN8A6NHC0 703 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ENO4A6NNW6 628 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PSMD12O00232 456 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 SYN3O14994 580 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 DENRO43583 198 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 AP1G1O43747 822 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 RAMP2O60895 175 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 CNTN5O94779 1100 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 WISP3O95389 354 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 SLC34A2O95436 690 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 S1PR4O95977 384 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ALDH1A1P00352 501 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 FGF1P05230 155 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 SNRPB2P08579 225 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 HAPLN1P10915 354 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 CD1EP15812 388 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 HLA-DPA1P20036 260 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 IMPDH1P20839 514 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 KCNA5P22460 613 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 FDXRP22570 491 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 YWHAQP27348 245 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PBX3P40426 434 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 MAPKAPK2P49137 400 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PRSS12P56730 875 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 YBEYP58557 167 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 MAXP61244 160 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 USP46P62068 366 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ACVR1Q04771 509 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 CACNB2Q08289 660 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 CRHR2Q13324 411 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 SERINC3Q13530 473 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 BTG3Q14201 252 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 POLD3Q15054 466 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 KCNA10Q16322 511 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 TRIM71Q2Q1W2 868 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 AGKQ53H12 422 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ALFQ53S48 1182 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ZNF789Q5FWF6 425 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 SDHAF4Q5VUM1 108 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 FOXB2Q5VYV0 432 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ZNF280DQ6N043 979 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 MRNIPQ6NTE8 343 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 HACD2Q6Y1H2 254 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 GK5Q6ZS86 529 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PTAR1Q7Z6K3 402 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 RAB44Q7Z6P3 723 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 MFN1Q8IWA4 741 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 MARVELD2Q8N4S9 558 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PCSK9Q8NBP7 692 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 KLHDC9Q8NEP7 349 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 GPR150Q8NGU9 434 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 RIN3Q8TB24 985 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ARRDC2Q8TBH0 407 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ZFAND2BQ8WV99 257 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 TRIB2Q92519 343 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 CLP1Q92989 425 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 USP13Q92995 863 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 FBXO32Q969P5 355 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PSMG2Q969U7 264 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ASB9Q96DX5 294 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 KLHL5Q96PQ7 755 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 FAM193BQ96PV7 902 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 NPAS2Q99743 824 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 DDX50Q9BQ39 737 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 SLC25A23Q9BV35 468 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 POLR1EQ9GZS1 481 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.09□□□□□ -1.11
GPC3-204ENST00000631057 GSTO2Q9H4Y5 243 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 SUDS3Q9H7L9 328 aaPredicted RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 POPDC3Q9HBV1 291 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 TLR8Q9NR97 1041 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 PAPOLBQ9NRJ5 636 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 COMMD8Q9NX08 183 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 IL37Q9NZH6 218 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 ADA2Q9NZK5 511 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 MARCH2Q9P0N8 246 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 PACSIN3Q9UKS6 424 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 SARDHQ9UL12 918 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 RIMKLBQ9ULI2 386 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 FIS1Q9Y3D6 152 aa8.09□□□□□ -1.11
GPC3-204ENST00000631057 MRPL42Q9Y6G3 142 aaKnown RBP8.09□□□□□ -1.11
GPC3-204ENST00000631057 C15orf38-AP3S2A0A0A6YYH1 394 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 FAM92AA1XBS5 289 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 OR6C75A6NL08 312 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 DRGXA6NNA5 263 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 FAM155AB1AL88 458 aaPredicted RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 ACOT8O14734 319 aa8.08□□□□□ -1.12
GPC3-204ENST00000631057 CD3EAPO15446 510 aaKnown RBP8.08□□□□□ -1.12
GPC3-204ENST00000631057 LDB2O43679 373 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms