RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TNFAIP3P21580 790 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 PPP6R3Q5H9R7 873 aaPredicted RBP19.03■□□□□ 0.64
SMN2-215ENST00000628696 ERMARDQ5T6L9 678 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 AFMIDQ63HM1 303 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 SPECC1LQ69YQ0 1117 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 ARHGAP36Q6ZRI8 547 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 DPPA4Q7L190 304 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 PRICKLE2Q7Z3G6 844 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 SPRED1Q7Z699 444 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 EXD3Q8N9H8 876 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 SGF29Q96ES7 293 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 KCTD15Q96SI1 283 aaPredicted RBP19.03■□□□□ 0.64
SMN2-215ENST00000628696 ARHGAP9Q9BRR9 750 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 LGR4Q9BXB1 951 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 WDR26Q9H7D7 661 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 TAS2R14Q9NYV8 317 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 SEPT10Q9P0V9 454 aa19.03■□□□□ 0.64
SMN2-215ENST00000628696 TNFRSF10CO14798 259 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 CCDC172P0C7W6 258 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 LIPCP11150 499 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 PNLIPP16233 465 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 FERP16591 822 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 ERCC2P18074 760 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 ZFP36L1Q07352 338 aaKnown RBP19.02■□□□□ 0.64
SMN2-215ENST00000628696 NSUN2Q08J23 767 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMN2-215ENST00000628696 NFATC3Q12968 1075 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 MAMLD1Q13495 774 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 MANEAQ5SRI9 462 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 PNCKQ6P2M8 343 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 RFX8Q6ZV50 586 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 ZFAND4Q86XD8 727 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 USP7Q93009 1102 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 ECHDC3Q96DC8 303 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 ERGIC2Q96RQ1 377 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 CMKLR1Q99788 373 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 SNRNP25Q9BV90 132 aaKnown RBP19.02■□□□□ 0.64
SMN2-215ENST00000628696 FAM117AQ9C073 453 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 PARVAQ9NVD7 372 aa19.02■□□□□ 0.64
SMN2-215ENST00000628696 PRAMEF33A0A0G2JMD5 474 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 TTC24A2A3L6 582 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 PDE2AO00408 941 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 ATMINO43313 823 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 PRAMEF10O60809 474 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 HOXC4P09017 264 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 GM2AP17900 193 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 TRIM23P36406 574 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 ETV5P41161 510 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 KCNC4Q03721 635 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 IL10RBQ08334 325 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 HLTFQ14527 1009 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMN2-215ENST00000628696 RFTN1Q14699 578 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 LINC00303Q3SY05 128 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 AMZ1Q400G9 498 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 MAP9Q49MG5 647 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 DENND2CQ68D51 928 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 VASH2Q86V25 355 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 ARHGAP12Q8IWW6 846 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 PELI3Q8N2H9 469 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 EXTL1Q92935 676 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 COL26A1Q96A83 441 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 TMEM159Q96B96 161 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 PEBP4Q96S96 227 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 SEMA6CQ9H3T2 930 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 CLMPQ9H6B4 373 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 CARS2Q9HA77 564 aaKnown RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 B4GALT6Q9UBX8 382 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 ACSL6Q9UKU0 697 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 PCDHB11Q9Y5F2 797 aa19.01■□□□□ 0.63
SMN2-215ENST00000628696 HEMK1Q9Y5R4 338 aaPredicted RBP19.01■□□□□ 0.63
SMN2-215ENST00000628696 PRSS38A1L453 326 aa19■□□□□ 0.63
SMN2-215ENST00000628696 EIF3CLB5ME19 914 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 NUDT21O43809 227 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 PRPSAP2O60256 369 aa19■□□□□ 0.63
SMN2-215ENST00000628696 RNF8O76064 485 aa19■□□□□ 0.63
SMN2-215ENST00000628696 ALDH4A1P30038 563 aa19■□□□□ 0.63
SMN2-215ENST00000628696 RENBPP51606 427 aa19■□□□□ 0.63
SMN2-215ENST00000628696 MAZP56270 477 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 OR1D5P58170 312 aa19■□□□□ 0.63
SMN2-215ENST00000628696 MYL5Q02045 173 aa19■□□□□ 0.63
SMN2-215ENST00000628696 TSR1Q2NL82 804 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
SMN2-215ENST00000628696 TMPRSS9Q7Z410 1059 aa19■□□□□ 0.63
SMN2-215ENST00000628696 ARFGAP1Q8N6T3 406 aa19■□□□□ 0.63
SMN2-215ENST00000628696 NPWQ8N729 165 aa19■□□□□ 0.63
SMN2-215ENST00000628696 KIAA1524Q8TCG1 905 aa19■□□□□ 0.63
SMN2-215ENST00000628696 NSMCE3Q96MG7 304 aa19■□□□□ 0.63
SMN2-215ENST00000628696 EIF3CQ99613 913 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 RDH14Q9HBH5 336 aa19■□□□□ 0.63
SMN2-215ENST00000628696 PHPT1Q9NRX4 125 aaPredicted RBP19■□□□□ 0.63
SMN2-215ENST00000628696 LMBRD1Q9NUN5 540 aa19■□□□□ 0.63
SMN2-215ENST00000628696 SPATS2LQ9NUQ6 558 aaKnown RBP19■□□□□ 0.63
SMN2-215ENST00000628696 ANO10Q9NW15 660 aa19■□□□□ 0.63
SMN2-215ENST00000628696 FOXJ2Q9P0K8 574 aa19■□□□□ 0.63
SMN2-215ENST00000628696 AKAP7Q9P0M2 348 aaPredicted RBP19■□□□□ 0.63
SMN2-215ENST00000628696 SEPT3Q9UH03 358 aa19■□□□□ 0.63
SMN2-215ENST00000628696 MYO18BQ8IUG5 2567 aa19■□□□□ 0.63
SMN2-215ENST00000628696 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
SMN2-215ENST00000628696 GOLGA6BA6NDN3 693 aa18.99■□□□□ 0.63
SMN2-215ENST00000628696 RHPN2P1A8MT19 583 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms