RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 LETM1O95202 739 aaPredicted RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 TSPAN7P41732 249 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 MAPK9P45984 424 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 GNPDA1P46926 289 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 SULT1E1P49888 294 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 LIG3P49916 1009 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 CCL11P51671 97 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 GFERP55789 205 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 MCCD1P59942 119 aaPredicted RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 CDK17Q00537 523 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 GNA12Q03113 381 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 RALGDSQ12967 914 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 IL10RAQ13651 578 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 NR1D2Q14995 579 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 MYLK3Q32MK0 819 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 TMEM52BQ4KMG9 183 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 C2CD6Q53TS8 623 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 MYO7BQ6PIF6 2116 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 GDPD4Q6W3E5 623 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 MMP21Q8N119 569 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 TTC39CQ8N584 583 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 RBMXL3Q8N7X1 1067 aaKnown RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 OR6C4Q8NGE1 309 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 OR2AP1Q8NGE2 309 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 OR4D9Q8NGE8 314 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 LMO3Q8TAP4 145 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 ARHGEF2Q92974 986 aaKnown RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 SLC35C1Q96A29 364 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 TBCBQ99426 244 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 CEP44Q9C0F1 390 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 B3GNT4Q9C0J1 378 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 DNAI2Q9GZS0 605 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 TWSG1Q9GZX9 223 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 CARS2Q9HA77 564 aaKnown RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 ARHGEF38Q9NXL2 777 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 DKK3Q9UBP4 350 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 SLC12A6Q9UHW9 1150 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 DNAI1Q9UI46 699 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 NEU3Q9UQ49 428 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 KCTD3Q9Y597 815 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.52□□□□□ -1.05
TCF4-258ENST00000627320 DGKBQ9Y6T7 804 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 SPG11Q96JI7 2443 aa8.52□□□□□ -1.05
TCF4-258ENST00000627320 A0A1B0GTL3 188 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 A6NCN8 305 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 FAM72CH0Y354 149 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 MASP2O00187 686 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 DAB1O75553 588 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 TMCC1O94876 653 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 CBX6O95503 412 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 CCNB1P14635 433 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 TNFAIP3P21580 790 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 HTR1BP28222 390 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 RGRP47804 291 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 PEX5P50542 639 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 RNASE9P60153 205 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 MC2RQ01718 297 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 CUL4AQ13619 759 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 NFIL3Q16649 462 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 FAM72AQ5TYM5 149 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 FAM72DQ6L9T8 149 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 JMJD6Q6NYC1 403 aaPredicted RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 FAM199XQ6PEV8 388 aaPredicted RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 DOK6Q6PKX4 331 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 OLFML1Q6UWY5 402 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 BEND5Q7L4P6 421 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 TMEM110Q86TL2 294 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 SETD3Q86TU7 594 aaPredicted RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 TRIM74Q86UV6 250 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 FAM72BQ86X60 149 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 C1orf131Q8NDD1 294 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 CT55Q8WUE5 264 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 INPP5DQ92835 1189 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 RAB7BQ96AH8 199 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 SNRNP40Q96DI7 357 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 C5orf34Q96MH7 638 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 NUDT9Q9BW91 350 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 GTPBP4Q9BZE4 634 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 THAP9Q9H5L6 903 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 MAGEF1Q9HAY2 307 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 SIDT1Q9NXL6 827 aaKnown RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 LHX3Q9UBR4 397 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 AJAP1Q9UKB5 411 aaPredicted RBP8.51□□□□□ -1.05
TCF4-258ENST00000627320 POLHQ9Y253 713 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 DOCK10Q96BY6 2186 aa8.51□□□□□ -1.05
TCF4-258ENST00000627320 ANKHD1Q8IWZ3 2542 aaKnown RBP8.5□□□□□ -1.05
TCF4-258ENST00000627320 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
TCF4-258ENST00000627320 IGLV3-10A0A075B6K4 115 aa8.5□□□□□ -1.05
TCF4-258ENST00000627320 ILVBLA1L0T0 632 aa8.5□□□□□ -1.05
TCF4-258ENST00000627320 F5H423 210 aaPredicted RBP8.5□□□□□ -1.05
TCF4-258ENST00000627320 CAPN5O15484 640 aaPredicted RBP8.5□□□□□ -1.05
TCF4-258ENST00000627320 THAP12O43422 761 aa8.5□□□□□ -1.05
TCF4-258ENST00000627320 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
TCF4-258ENST00000627320 ZG16O60844 167 aa8.5□□□□□ -1.05
TCF4-258ENST00000627320 RECQL5O94762 991 aaPredicted RBP8.5□□□□□ -1.05
TCF4-258ENST00000627320 KIAA0754O94854 1291 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms