RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TMEM168Q9H0V1 697 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 PCDH18Q9HCL0 1135 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 NCKIPSDQ9NZQ3 722 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 KLQ9UEF7 1012 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 GPR34Q9UPC5 381 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 UNC13CQ8NB66 2214 aa13.57□□□□□ -0.24
SOX2-OT-241ENST00000626948 A0A087X0T9 212 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 TMEM110-MUSTN1A8MSY1 372 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 SMTNL1A8MU46 457 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 GOLGA6L22H0YM25 854 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 EFSO43281 561 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 FAM228BP0C875 321 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 ARSEP51690 589 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 AP1S1P61966 158 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 ELOCQ15369 112 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 ESRP1Q6NXG1 681 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 PNCKQ6P2M8 343 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 LVRNQ6Q4G3 990 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 GPR155Q7Z3F1 870 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 HSD11B1LQ7Z5J1 315 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 TSPAN33Q86UF1 283 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 LSMEM2Q8N112 164 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 OR56A4Q8NGH8 313 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 TPCN2Q8NHX9 752 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 HSPH1Q92598 858 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 NAT6Q93015 286 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 CBX8Q9HC52 389 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 SEPT3Q9UH03 358 aa13.56□□□□□ -0.24
SOX2-OT-241ENST00000626948 BOD1L1Q8NFC6 3051 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 NPIPB15A6NHN6 443 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 D6RAR5 112 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 KLK10O43240 276 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 HEXIM1O94992 359 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 SOD1P00441 154 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 TNFP01375 233 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 PDHA1P08559 390 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 HOXC4P09017 264 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ALPIP09923 528 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ELFN1P0C7U0 828 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 CTSEP14091 401 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 HGFP14210 728 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 RPIAP49247 311 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 BLKP51451 505 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 SRSF6Q13247 344 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ARHGAP40Q5TG30 622 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 LZTR1Q8N653 840 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 NIPA2Q8N8Q9 360 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 LRRN4Q8WUT4 740 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 KCNE4Q8WWG9 221 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ZNF599Q96NL3 588 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 SEMA4CQ9C0C4 833 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 SPATS2LQ9NUQ6 558 aaKnown RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 EVA1BQ9NVM1 165 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ATXN7L1Q9ULK2 861 aaPredicted RBP13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 SCINQ9Y6U3 715 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 TENM4Q6N022 2769 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 ZNF462Q96JM2 2506 aa13.55□□□□□ -0.24
SOX2-OT-241ENST00000626948 TEX51A0A1B0GUA7 166 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 H3BRJ5 948 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 FZD6O60353 706 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 TNFSF15O95150 251 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 CYP1A2P05177 515 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 RPLP0P05388 317 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 CEACAM5P06731 702 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 MYBL1P10243 752 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 HTR1BP28222 390 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 ETV3P41162 512 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 FANCCQ00597 558 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 CLN3Q13286 438 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 SPIDRQ14159 915 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 ACOX1Q15067 660 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 BOLA3Q53S33 107 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 CFAP58Q5T655 872 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 FOXR1Q6PIV2 292 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 C17orf82Q86X59 251 aaPredicted RBP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 ZNF843Q8N446 348 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 WDR36Q8NI36 951 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 SNRNP27Q8WVK2 155 aaKnown RBP13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 PIH1D2Q8WWB5 315 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 TTC9Q92623 222 aa13.54□□□□□ -0.24
SOX2-OT-241ENST00000626948 GLMNQ92990 594 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms