RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MAATS1Q7Z4T9 603 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 PRUNE1Q86TP1 453 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 ZC3H18Q86VM9 953 aaKnown RBP12.75□□□□□ -0.37
PNKP-217ENST00000625216 GATAD2AQ86YP4 633 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 GALNT15Q8N3T1 639 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 GLIS1Q8NBF1 620 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 OR6K2Q8NGY2 324 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 LRRN4Q8WUT4 740 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 P3H4Q92791 437 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 KLK6Q92876 244 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 VOPP1Q96AW1 172 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 KLHL32Q96NJ5 620 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 OLFM3Q96PB7 478 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 PARD6BQ9BYG5 372 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 KLC2Q9H0B6 622 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 NEU2Q9Y3R4 380 aa12.75□□□□□ -0.37
PNKP-217ENST00000625216 A6NNZ2 444 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 AREL1O15033 823 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 ABL2P42684 1182 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 CSNK1DP48730 415 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 PAPOLAP51003 745 aaKnown RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 GDF10P55107 478 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 BNIP3Q12983 259 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 PTK6Q13882 451 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 RFTN1Q14699 578 aaPredicted RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 TRADDQ15628 312 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 AFMIDQ63HM1 303 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 KYAT3Q6YP21 454 aaKnown RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 ARHGAP12Q8IWW6 846 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 DENND6BQ8NEG7 585 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 OR13H1Q8NG92 308 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 GRK7Q8WTQ7 553 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 BMFQ96LC9 184 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 ZNF641Q96N77 438 aaPredicted RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.37
PNKP-217ENST00000625216 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 SLC39A8Q9C0K1 460 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 PDFQ9HBH1 243 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
PNKP-217ENST00000625216 CA5BQ9Y2D0 317 aa12.74□□□□□ -0.37
PNKP-217ENST00000625216 MAP1BP46821 2468 aaKnown RBP12.73□□□□□ -0.37
PNKP-217ENST00000625216 IGLON5A6NGN9 336 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 H7C0C1 242 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 J3KR12 359 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 TOR1BO14657 336 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 FPGTO14772 594 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 MYBL2P10244 700 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 ETS1P14921 441 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 RABIFP47224 123 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 ATP5OP48047 213 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 CLDN2P57739 230 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
PNKP-217ENST00000625216 ILKQ13418 452 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 FGL2Q14314 439 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 TMCO4Q5TGY1 634 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 WDR93Q6P2C0 686 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 GCNT7Q6ZNI0 430 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 Q6ZSR6 202 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 CDKL3Q8IVW4 592 aaPredicted RBP12.73□□□□□ -0.37
PNKP-217ENST00000625216 EID2Q8N6I1 236 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 SEC14L1Q92503 715 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 ANKRD7Q92527 254 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 CELF6Q96J87 481 aaKnown RBP12.73□□□□□ -0.37
PNKP-217ENST00000625216 TUBGCP5Q96RT8 1024 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 MYOCQ99972 504 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 C1QTNF7Q9BXJ2 289 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 DPH5Q9H2P9 285 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 SUV39H2Q9H5I1 410 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 EPB41L5Q9HCM4 733 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 FZD3Q9NPG1 666 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 GPR27Q9NS67 375 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 LHX3Q9UBR4 397 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 ZNF148Q9UQR1 794 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
PNKP-217ENST00000625216 GOLGA8CPA6NN73 597 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 DYNC1I1O14576 645 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 GAS8O95995 478 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 KRT14P02533 472 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 TIMP2P16035 220 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 XPAP23025 273 aaPredicted RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 RBL1P28749 1068 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 TNFRSF8P28908 595 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 SERPINB6P35237 376 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 RPL21P46778 160 aaKnown RBP12.72□□□□□ -0.37
PNKP-217ENST00000625216 NR2C2P49116 596 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 RENBPP51606 427 aa12.72□□□□□ -0.37
PNKP-217ENST00000625216 HNRNPKP61978 463 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms