RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 GPN2Q9H9Y4 310 aaPredicted RBP14.16□□□□□ -0.14
LDB3-209ENST00000623056 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CHST12Q9NRB3 414 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 DAPK2Q9UIK4 370 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 TRHDEQ9UKU6 1024 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 TRAF6Q9Y4K3 522 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 CPQQ9Y646 472 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 A0A0G2JMZ2 1700 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 LRRC37A2A6NM11 1700 aa14.16□□□□□ -0.14
LDB3-209ENST00000623056 M0QYT0 321 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 FXYD1O00168 92 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 PEX10O60683 326 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 ARIH2O95376 493 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 FCGR1AP12314 374 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 EEF1B2P24534 225 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 RFC2P35250 354 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 SLC1A2P43004 574 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 ACADSBP45954 432 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 KPNA1P52294 538 aaPredicted RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 ADARB1P78563 741 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 CYP51A1Q16850 503 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 FAM83EQ2M2I3 478 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 KIF19Q2TAC6 998 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 VPS26BQ4G0F5 336 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 LDLRAP1Q5SW96 308 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 NAPEPLDQ6IQ20 393 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 PKN3Q6P5Z2 889 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 CATSPERGQ6ZRH7 1159 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 RNF135Q8IUD6 432 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 TMCO5AQ8N6Q1 288 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 USP33Q8TEY7 942 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 CASP10Q92851 521 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 ALPK1Q96QP1 1244 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 NFKBIZQ9BYH8 718 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 MRM3Q9HC36 420 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 SPON1Q9HCB6 807 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 TSC22D4Q9Y3Q8 395 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 A0A087WZ62 844 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 UBFD1O14562 309 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 DAB1O75553 588 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 GPIP06744 558 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 CAPN3P20807 821 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 ELK4P28324 431 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 IDUAP35475 653 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 OPRL1P41146 370 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 BFSP2Q13515 415 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 TNFAIP1Q13829 316 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 BTBD8Q5XKL5 378 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 PLPPR4Q7Z2D5 763 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 BTLAQ7Z6A9 289 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 UNC93AQ86WB7 457 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 MINDY1Q8N5J2 469 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 ZC3H15Q8WU90 426 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 PHF21BQ96EK2 531 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 RPL10LQ96L21 214 aaKnown RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 C3orf30Q96M34 536 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
LDB3-209ENST00000623056 MROQ9BYG7 248 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 LHPPQ9H008 270 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 PIGVQ9NUD9 493 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 NDUFAF1Q9Y375 327 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 CITO14578 2027 aa14.15□□□□□ -0.14
LDB3-209ENST00000623056 BPTFQ12830 3046 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 SHROOM3Q8TF72 1996 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 INPP4BO15327 924 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 NCAM2O15394 837 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 MTHFD1P11586 935 aaKnown RBP14.14□□□□□ -0.15
LDB3-209ENST00000623056 TSPAN8P19075 237 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 EDNRBP24530 442 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ARNTP27540 789 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ARCN1P48444 511 aaKnown RBP14.14□□□□□ -0.15
LDB3-209ENST00000623056 SLC12A2P55011 1212 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ADIGQ0VDE8 80 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 TUBA3CQ13748 450 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 POU6F1Q14863 301 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 PCID2Q5JVF3 399 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 XAF1Q6GPH4 301 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ESRP1Q6NXG1 681 aaKnown RBP14.14□□□□□ -0.15
LDB3-209ENST00000623056 BNIPLQ7Z465 357 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ABHD11Q8NFV4 315 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 TRPM4Q8TD43 1214 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 NT5C3BQ969T7 300 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 CCDC126Q96EE4 140 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 HSFY1Q96LI6 401 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 C12orf42Q96LP6 360 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 TEKT5Q96M29 485 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 ZNF347Q96SE7 839 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 NPY6RQ99463 290 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 TRIM8Q9BZR9 551 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 MAF1Q9H063 256 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 GSTO2Q9H4Y5 243 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 GIT1Q9Y2X7 761 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 VWA7Q9Y334 891 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
LDB3-209ENST00000623056 C9JVG2 144 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms