RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PLXND1Q9Y4D7 1925 aa19.91■□□□□ 0.78
PDLIM2-221ENST00000622702 GOLGA8MH3BSY2 632 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 SPINT1O43278 529 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 MAP3K13O43283 966 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 AP1G1O43747 822 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 CTPS1P17812 591 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 TPMTP51580 245 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 CBLBQ13191 982 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 ERAP2Q6P179 960 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 C11orf74Q86VG3 221 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 FBXO25Q8TCJ0 367 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 DUSP15Q9H1R2 295 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 NEUROG2Q9H2A3 272 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 HACD3Q9P035 362 aa19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 MBD1Q9UIS9 605 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-221ENST00000622702 IGHV1OR15-9A0A0B4J2B8 117 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 PPFIA2O75334 1257 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 ALPIP09923 528 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 HNF1BP35680 557 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 MMP12P39900 470 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 CARSP49589 748 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 ELP6Q0PNE2 266 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 ERCC6LQ2NKX8 1250 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 PLK5Q496M5 336 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 LRRC73Q5JTD7 316 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 DPPA4Q7L190 304 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 ZCCHC9Q8N567 271 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 EIF1ADQ8N9N8 165 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 GANCQ8TET4 914 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 ZC3H10Q96K80 434 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 SMIM14Q96QK8 99 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 FOXP3Q9BZS1 431 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 TRABDQ9H4I3 376 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 PIH1D1Q9NWS0 290 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 B4GALT6Q9UBX8 382 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 FADS3Q9Y5Q0 445 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 V9GYY5 206 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 SPAG17Q6Q759 2223 aa19.89■□□□□ 0.77
PDLIM2-221ENST00000622702 NPIPB15A6NHN6 443 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 PRKCGP05129 697 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 CYP2A6P11509 494 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 ECHS1P30084 290 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 VIPR1P32241 457 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 NPY2RP49146 381 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 TAS2R38P59533 333 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 ELF2Q15723 593 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 CDKN3Q16667 212 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 PDIK1LQ8N165 341 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 IFT81Q8WYA0 676 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 BFARQ9NZS9 450 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 SPO11Q9Y5K1 396 aa19.88■□□□□ 0.77
PDLIM2-221ENST00000622702 ABCA7Q8IZY2 2146 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 PLRG1O43660 514 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 GFRA3O60609 400 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 RHOBTB1O94844 696 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 PIRTP0C851 137 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 TPH1P17752 444 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 TNFRSF8P28908 595 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 OXTRP30559 389 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 ADPRHP54922 357 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 ARL4CP56559 192 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 SESN2P58004 480 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 FAM193AP78312 1265 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 RALGDSQ12967 914 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 HLTFQ14527 1009 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 PTPRRQ15256 657 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 HIF1AQ16665 826 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 CERCAMQ5T4B2 595 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 ARMC3Q5W041 872 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 LAIR1Q6GTX8 287 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 FAM124AQ86V42 546 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 BRSK1Q8TDC3 778 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 PHACTR1Q9C0D0 580 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 IL22Q9GZX6 179 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 KDM4CQ9H3R0 1056 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 SGK2Q9HBY8 427 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 ZNF711Q9Y462 761 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 THADAQ6YHU6 1953 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 NUMA1Q14980 2115 aa19.87■□□□□ 0.77
PDLIM2-221ENST00000622702 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 E7ESA3 106 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TSPAN6O43657 245 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 AVILO75366 819 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 LHCGRP22888 699 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 CD6P30203 668 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 RPL6Q02878 288 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TMEM52BQ4KMG9 183 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 FNBP1LQ5T0N5 605 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 CRTC1Q6UUV9 634 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 SLC36A4Q6YBV0 504 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TMEFF1Q8IYR6 380 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 GPR161Q8N6U8 529 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 BLOC1S5Q8TDH9 187 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 TOE1Q96GM8 510 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 PWWP2AQ96N64 755 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 RANBP9Q96S59 729 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 BTBD1Q9H0C5 482 aa19.86■□□□□ 0.77
PDLIM2-221ENST00000622702 NCDNQ9UBB6 729 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms