RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MID1O15344 667 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 UNGP13051 313 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PGAM1P18669 254 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ACTN3Q08043 901 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CTBP1Q13363 440 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ARHGAP24Q8N264 748 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MMGT1Q8N4V1 131 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SLC43A3Q8NBI5 491 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 NOA1Q8NC60 698 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PCDH19Q8TAB3 1148 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ACTRT1Q8TDG2 376 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PIWIL1Q96J94 861 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 NDNQ99608 321 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 FAM126AQ9BYI3 521 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 FAM129AQ9BZQ8 928 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 COLEC10Q9Y6Z7 277 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 BDP1A6H8Y1 2624 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 A0A088AWK7 358 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 DNALI1O14645 258 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PHGDHO43175 533 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SIN3BO75182 1162 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ATF6P18850 670 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ZNF10P21506 573 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 GP5P40197 560 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 HPCAP84074 193 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 HYAL1Q12794 435 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SLC29A2Q14542 456 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CST6Q15828 149 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 CERCAMQ5T4B2 595 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 VPS50Q96JG6 964 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 TBATAQ96M53 351 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PRPF18Q99633 342 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 FEM1AQ9BSK4 669 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 RIOK2Q9BVS4 552 aaKnown RBP9.11□□□□□ -0.95
HDAC9-229ENST00000622668 PITPNM3Q9BZ71 974 aa9.11□□□□□ -0.95
HDAC9-229ENST00000622668 MGAT4DA6NG13 374 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 GNGT2O14610 69 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 ANXA5P08758 320 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 IL9P15248 144 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 CSTF2P33240 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 SCNN1AP37088 669 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 MINDY4Q4G0A6 757 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 ZDHHC20Q5W0Z9 365 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 POTEHQ6S545 545 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 GAREM2Q75VX8 874 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 REXO1L1PQ8IX06 675 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 HEXDCQ8WVB3 486 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 ALG3Q92685 438 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 LRGUKQ96M69 825 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 C12orf66Q96MD2 445 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 RRAGDQ9NQL2 400 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 TBC1D30Q9Y2I9 924 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 EVPLQ92817 2033 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 A6NNZ2 444 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 GABRDO14764 452 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 EDIL3O43854 480 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 LILRB3O75022 631 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 CD70P32970 193 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 CHRNA4P43681 627 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 SERPINB8P50452 374 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 RFTN1Q14699 578 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 TUBB8Q3ZCM7 444 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 TMEM31Q5JXX7 168 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 ANKS6Q68DC2 871 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 AMZ2Q86W34 360 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 FBXO39Q8N4B4 442 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 VPS37AQ8NEZ2 397 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 COL26A1Q96A83 441 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 MAGED4Q96JG8 741 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 PDLIM2Q96JY6 352 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 TRIM55Q9BYV6 548 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 EXO5Q9H790 373 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 FZD3Q9NPG1 666 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 FBXO5Q9UKT4 447 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 KCNK6Q9Y257 313 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 C16orf96A6NNT2 1141 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 C5orf58C9J3I9 102 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 CD3EAPO15446 510 aaKnown RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 LIASO43766 372 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 SKAP2O75563 359 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 RPP40O75818 363 aaKnown RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 RBP1P09455 135 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 OXTRP30559 389 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 CCNG1P51959 295 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 JAM2P57087 298 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 PDE1CQ14123 709 aaPredicted RBP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 FAM171BQ6P995 826 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 UNC5AQ6ZN44 842 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 Q6ZVL8 140 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC9-229ENST00000622668 OR2W6PQ8NHA6 318 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 LMLNQ96KR4 655 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 MYADMQ96S97 322 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 GSDMCQ9BYG8 508 aa9.1□□□□□ -0.95
HDAC9-229ENST00000622668 RNF38Q9H0F5 515 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms