RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TNK2Q07912 1038 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM25Q14258 630 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ACAP2Q15057 778 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 FASTKD1Q53R41 847 aaKnown RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 XAF1Q6GPH4 301 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 LYPD8Q6UX82 237 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SLC16A12Q6ZSM3 486 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ZCCHC23Q6ZST2 131 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PRSS48Q7RTY5 328 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 SNX29P2Q8IUI4 249 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PAF1Q8N7H5 531 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CNTD1Q8N815 330 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 NIPA2Q8N8Q9 360 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 FAM71DQ8N9W8 422 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 POC5Q8NA72 575 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 AGBL3Q8NEM8 1001 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 BPIFB6Q8NFQ5 453 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 RHOXF1Q8NHV9 184 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CITED4Q96RK1 184 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TEX13BQ9BXU2 312 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 NIF3L1Q9GZT8 377 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 EFCAB1Q9HAE3 211 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 POLMQ9NP87 494 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 NECTIN3Q9NQS3 549 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 ZNF302Q9NR11 478 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 UCKL1Q9NWZ5 548 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 MAFFQ9ULX9 164 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 GRIP1Q9Y3R0 1128 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CDY2AQ9Y6F7 541 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 CDY1Q9Y6F8 540 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 DGKBQ9Y6T7 804 aa7.53□□□□□ -1.2
TRIM49B-202ENST00000622138 PDZK1P1A8MUH7 402 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 H3BUI4 141 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CYB561D2O14569 222 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CTDSP2O14595 271 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 LYPLA1O75608 230 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 GABARAPO95166 117 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ITGB3P05106 788 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 S100A6P06703 90 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ENO3P13929 434 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TCN1P20061 433 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CDH5P33151 784 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 KRT20P35900 424 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SERPINB9P50453 376 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PLA2G16P53816 162 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 GABARAPL2P60520 117 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 RHAGQ02094 409 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SLC13A2Q13183 592 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PIGHQ14442 188 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ATP6AP1Q15904 470 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CARTPTQ16568 116 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TAZQ16635 292 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 NBPF12Q5TAG4 269 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PRAMEF18Q5VWM3 479 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SLFN12LQ6IEE8 588 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 EPGNQ6UW88 154 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 NPNTQ6UXI9 565 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 BBS12Q6ZW61 710 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 USP51Q70EK9 711 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PIWIL3Q7Z3Z3 882 aaKnown RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CCDC103Q8IW40 242 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 NIM1KQ8IY84 436 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TMEM35BQ8NCS4 154 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SHCBP1Q8NEM2 672 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SLCO4A1Q96BD0 722 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ZNF668Q96K58 619 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 HEXIM2Q96MH2 286 aaKnown RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SORT1Q99523 831 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ZSCAN5AQ9BUG6 496 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 KIFC1Q9BW19 673 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 FRMD8P1Q9BZ68 369 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 LHPPQ9H008 270 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 XYLT2Q9H1B5 865 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 UPF3AQ9H1J1 476 aaKnown RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 ADNPQ9H2P0 1102 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PAK1IP1Q9NWT1 392 aaPredicted RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TOR4AQ9NXH8 423 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 SNX7Q9UNH6 387 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 AGTPBP1Q9UPW5 1226 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 TNS1Q9HBL0 1735 aaKnown RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 LOC285556D6RIA3 1793 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 PABPN1LA6NDY0 278 aaKnown RBP7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 H3BMM5 538 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 HDAC3O15379 428 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 GLRA3O75311 464 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 AVILO75366 819 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 HOXC6P09630 235 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 COL6A1P12109 1028 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 DPEP1P16444 411 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 CD9P21926 228 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 KDELR1P24390 212 aa7.52□□□□□ -1.21
TRIM49B-202ENST00000622138 HTR3AP46098 478 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms