RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SNX17Q15036 470 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PFKFB4Q16877 469 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 OTUD3Q5T2D3 398 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 HECTD2Q5U5R9 776 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 BORAQ6PGQ7 559 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 TMEM26Q6ZUK4 368 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ERO1BQ86YB8 467 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CMTR2Q8IYT2 770 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 AFAP1L2Q8N4X5 818 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 C3orf58Q8NDZ4 430 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 KCTD13Q8WZ19 329 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 TUBGCP3Q96CW5 907 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MRGPRX2Q96LB1 330 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SLC9A7Q96T83 725 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 GAD1Q99259 594 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 GSTO2Q9H4Y5 243 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MROH8Q9H579 483 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 NT5MQ9NPB1 228 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MARCH4Q9P2E8 410 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 NCF1BA6NI72 391 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 NCF1CA8MVU1 366 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 EI24O14681 340 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 MAFKO60675 156 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 BAIAP3O94812 1187 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CAPNS1P04632 268 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 NCF1P14598 390 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ARSDP51689 593 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 HK2P52789 917 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 WNT3AP56704 352 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ADRM1Q16186 407 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CYP51A1Q16850 503 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 PLA2G4EQ3MJ16 856 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 FGD3Q5JSP0 725 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 SMG8Q8ND04 991 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 ANKRD60Q9BZ19 345 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 EVLQ9UI08 416 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 CNOT11Q9UKZ1 510 aaKnown RBP15.81■□□□□ 0.12
NPHP4-211ENST00000622020 TIMM22Q9Y584 194 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 DNAJC15Q9Y5T4 150 aa15.81■□□□□ 0.12
NPHP4-211ENST00000622020 DLGAP1O14490 977 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 PIP5K1BO14986 540 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ANGPT2O15123 496 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 COQ9O75208 318 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 PAMP19021 973 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 WARSP23381 471 aaKnown RBP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ARHGAP12Q8IWW6 846 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 DQX1Q8TE96 717 aaKnown RBP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 TRPC4APQ8TEL6 797 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 GIPC3Q8TF64 312 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 HDAC10Q969S8 669 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ESAMQ96AP7 390 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 TMEM74Q96NL1 305 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 POLR1BQ9H9Y6 1135 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 CXorf21Q9HAI6 301 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 FNDC3AQ9Y2H6 1198 aaKnown RBP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 A0A087X1B8 175 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ANXA9O76027 345 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 NR4A1P22736 598 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 EEF1B2P24534 225 aaKnown RBP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 CD86P42081 329 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 DIO3P55073 304 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 POU4F1Q01851 419 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 SCAPQ12770 1279 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 MERTKQ12866 999 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 UBXN11Q5T124 520 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ELMSAN1Q6PJG2 1045 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 LARP4Q71RC2 724 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPHP4-211ENST00000622020 ERMP1Q7Z2K6 904 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 SLC15A3Q8IY34 581 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 NUDT8Q8WV74 236 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 PTERQ96BW5 349 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 SLAMF8Q9P0V8 285 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 CPA4Q9UI42 421 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 BLOC1S6Q9UL45 172 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 LAMA3Q16787 3333 aa15.8■□□□□ 0.12
NPHP4-211ENST00000622020 UBXN8O00124 270 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CLOCKO15516 846 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 XPOTO43592 962 aaKnown RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 PAGE1O75459 146 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 PRSS56P0CW18 603 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CLCN2P51788 898 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 PFKPQ01813 784 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 BNIP3Q12983 259 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 FRG1Q14331 258 aaKnown RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 OGFOD2Q6N063 350 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 PPP4R4Q6NUP7 873 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 PTGR2Q8N8N7 351 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 FNDC8Q8TC99 324 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CDCA5Q96FF9 252 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 FCRL2Q96LA5 508 aaPredicted RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 TMEM209Q96SK2 561 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CNGB3Q9NQW8 809 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 TSR3Q9UJK0 312 aaKnown RBP15.79■□□□□ 0.12
NPHP4-211ENST00000622020 VWA7Q9Y334 891 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 KPNA6O60684 536 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 CNTN4Q8IWV2 1026 aa15.79■□□□□ 0.12
NPHP4-211ENST00000622020 VPS50Q96JG6 964 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms