RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MARCH5Q9NX47 278 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 TBC1D30Q9Y2I9 924 aa9.46□□□□□ -0.9
PDPN-212ENST00000621990 SLC12A8A0AV02 714 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 GJB3O75712 270 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 UPP2O95045 317 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ELNP15502 786 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 CD1DP15813 335 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 OGNP20774 298 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 ACVRL1P37023 503 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 AQP4P55087 323 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 HERVK_113P63132 956 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 MS4A2Q01362 244 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ART3Q13508 389 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 MAPRE2Q15555 327 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 TRIP10Q15642 601 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 UGT3A2Q3SY77 523 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 GPR158Q5T848 1215 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 FAM171A1Q5VUB5 890 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 C8orf82Q6P1X6 216 aaPredicted RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 CIR1Q86X95 450 aaPredicted RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 TICAM1Q8IUC6 712 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 HIPK4Q8NE63 616 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 OR6P1Q8NGX9 317 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 RHEBL1Q8TAI7 183 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 C2orf15Q8WU43 125 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 TOP1MTQ969P6 601 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 PTERQ96BW5 349 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 MGME1Q9BQP7 344 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 TTLL2Q9BWV7 592 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ERVK-6Q9BXR3 956 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 FAM192AQ9GZU8 254 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDPN-212ENST00000621990 RIMS3Q9UJD0 308 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 G3BP2Q9UN86 482 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 KCTD3Q9Y597 815 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 PCDHGA7Q9Y5G6 932 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 CD3EAPO15446 510 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 AP1G1O43747 822 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 RPP40O75818 363 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 SOAT2O75908 522 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 GLP2RO95838 553 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 VCLP18206 1134 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 TACR2P21452 398 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ALDH1A3P47895 512 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ACADVLP49748 655 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 STX5Q13190 355 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 LRP8Q14114 963 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 MRNIPQ6NTE8 343 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 RSPO2Q6UXX9 243 aaPredicted RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 LARP4Q71RC2 724 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDPN-212ENST00000621990 LDB1Q86U70 411 aaPredicted RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 PIM3Q86V86 326 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 TBATAQ96M53 351 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 CEP295NLQ96MC4 621 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 ASB2Q96Q27 587 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 TUBGCP5Q96RT8 1024 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 MRPL1Q9BYD6 325 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 ALG9Q9H6U8 611 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 HACD3Q9P035 362 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 SUCOQ9UBS9 1254 aaKnown RBP9.45□□□□□ -0.9
PDPN-212ENST00000621990 TRAF6Q9Y4K3 522 aa9.45□□□□□ -0.9
PDPN-212ENST00000621990 PRSS51A0A1B0GVH4 220 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 OR51F1A6NGY5 319 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CCL22O00626 93 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 MAP3K13O43283 966 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ALDH1A1P00352 501 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 FGF4P08620 206 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 UBTFL6P0CB48 400 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 ZNF37AP17032 561 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 HOXD9P28356 352 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 ETFBP38117 255 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 STC1P52823 247 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 SEMA3AQ14563 771 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 UNC50Q53HI1 259 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 HACD2Q6Y1H2 254 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 SPNS2Q8IVW8 549 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 PNPLA1Q8N8W4 532 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ASB9Q96DX5 294 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 DNAJC1Q96KC8 554 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 GLT1D1Q96MS3 346 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CASD1Q96PB1 797 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 NPAS2Q99743 824 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 TSEN34Q9BSV6 310 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 MAGEH1Q9H213 219 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CCSER2Q9H7U1 834 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 INTS10Q9NVR2 710 aaKnown RBP9.44□□□□□ -0.9
PDPN-212ENST00000621990 RNF186Q9NXI6 227 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 SLC27A5Q9Y2P5 690 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 ARL5AQ9Y689 179 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 CCDC162PA2VCL2 907 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 H3BNC9 293 aa9.44□□□□□ -0.9
PDPN-212ENST00000621990 PSMD12O00232 456 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms